Burkholderia seminalis: WJ12_16550
Help
Entry
WJ12_16550 CDS
T04851
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
bsem
Burkholderia seminalis
Pathway
bsem01501
beta-Lactam resistance
bsem01503
Cationic antimicrobial peptide (CAMP) resistance
bsem02020
Two-component system
bsem03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
WJ12_16550
09132 Signal transduction
02020 Two-component system
WJ12_16550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WJ12_16550
01503 Cationic antimicrobial peptide (CAMP) resistance
WJ12_16550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_16550
02044 Secretion system [BR:
bsem02044
]
WJ12_16550
01504 Antimicrobial resistance genes [BR:
bsem01504
]
WJ12_16550
Transporters [BR:
bsem02000
]
Other transporters
Pores ion channels [TC:
1
]
WJ12_16550
Secretion system [BR:
bsem02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
WJ12_16550
RTX toxin transporter
WJ12_16550
Multiple protein transporter
WJ12_16550
RaxAB-RaxC type I secretion system protein
WJ12_16550
Antimicrobial resistance genes [BR:
bsem01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
WJ12_16550
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
WJ12_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PH_9
Motif
Other DBs
NCBI-ProteinID:
AOJ26551
LinkDB
All DBs
Position
3:complement(152460..153887)
Genome browser
AA seq
475 aa
AA seq
DB search
MMKRSFAVVLTAVALAAALPASAQMLDVYRTRDDVAATQAGSMASATACGARRLDDRPLA
LEDAILLAICSHPQLSRTWADARAATAEVGVSKAAYLPTLNATAGIQRDNVNTTYTGGFS
GDQRSTSRYGMLNLSWVLFDFGKRGANLDRARALLRAANAAHDDALQSVFFDAAQAFYAL
RDAQAALEAAQAVEHAAQESLAEASARHDGGAGTLGDALQAQTTYRKALLDRVSAEGDLQ
NAIGTLATTLGADADTPLRIADAEPSPDRDDFTRGVANLIAEAKRDHPKLIAARERLEAA
RDQIRAVRAQSLPTISLMGSLSRNNPSYQQQPSLFQLQSSHSNSIGIQVSIPLFEGFASG
YRIAQAKAQADAQEADVRSTELKVSLDVWKSYQSLQTDTTNLDNSQHLLDTALHSLDIAR
GRYKAGVGTFTELLNAQSALADARRQRVLAVSRWRTARLKLAESLGRLGLWNDAS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgatcattcgccgtcgtgctgaccgccgttgcgctggccgccgcgctgccc
gcgagcgcgcagatgctcgacgtctatcgcacgcgcgacgacgtcgcggcgacgcaggcc
gggtcgatggcatcggccaccgcgtgcggcgcacggcgcctcgacgaccggccgctcgcc
ctggaggacgcgatcctgctcgcgatctgctcccatccgcaactgagccgcacgtgggcg
gatgcacgcgcggcgacggccgaggtcggcgtgtcgaaggccgcgtacctgccgacgctg
aacgcgacggccgggatccagcgcgacaacgtgaacacgacctatacgggcggattctcc
ggcgatcagcgcagcaccagccgttacggcatgctcaacctgagctgggtgctgttcgat
ttcggcaagcgcggcgcgaacctcgaccgtgcgcgcgcgttgctgcgcgcggccaacgcg
gcgcacgacgacgcgttgcagagcgtcttcttcgacgcggcgcaggcgttttatgcgctg
cgcgatgcgcaggcggcgctcgaggccgcccaggcggtcgaacatgcggcgcaggagagc
ctggccgaagcaagcgcgcggcacgacggcggcgccggcacgctcggcgacgcgttgcag
gcgcagacgacctatcgcaaggcgctgctcgaccgcgtgagcgcggagggcgacctgcag
aacgcgatcggcacgctcgcgacgacgctcggcgcggacgccgacacgccgctgcggatc
gccgacgcggaaccgtcgcccgatcgcgacgatttcacgcgcggcgtcgcgaacctgatc
gccgaagcgaagcgcgatcacccgaaactgatcgccgcccgcgagcggctcgaagcggcg
cgcgaccagatccgcgcggtgcgcgcccagtcgctgccgacgatttcgctgatgggcagc
ctctcgcgcaacaacccgtcgtaccagcagcagccgtcgctgttccagttgcagagcagt
cacagcaactcgatcggcatccaggtttcgattccgctgttcgagggattcgcatccggg
tatcgcatcgcgcaggcgaaggcgcaggccgacgcgcaggaagccgatgtgcgcagtacc
gaactcaaggtgtcgctcgacgtgtggaagagctaccagagcttgcaaaccgacacgacg
aacctcgacaactcgcagcatctgctcgacaccgcgctgcattcgctcgacatcgcccgc
ggccgctacaaggccggggtcggcacgttcacggaactgctgaatgcgcagtcggcgctc
gcggatgcgcgccggcagcgcgtgctcgcggtgtcgaggtggcggaccgcgagactgaag
ctggccgagagccttgggaggttgggattatggaacgacgcgagttga
DBGET
integrated database retrieval system