Burkholderia semiarida: R0290_29150
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Entry
R0290_29150 CDS
T10421
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bser Burkholderia semiarida
Pathway
bser01501
beta-Lactam resistance
bser02024
Quorum sensing
Module
bser_M00642
Multidrug resistance, efflux pump MexJK-OprM
bser_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R0290_29150
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R0290_29150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bser02000
]
R0290_29150
01504 Antimicrobial resistance genes [BR:
bser01504
]
R0290_29150
Transporters [BR:
bser02000
]
Other transporters
Pores ion channels [TC:
1
]
R0290_29150
Antimicrobial resistance genes [BR:
bser01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R0290_29150
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
R0290_29150
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
R0290_29150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DIMCO_N
CtIP_N
HH_AprE
ANG-1
DUF3349
Motif
Other DBs
NCBI-ProteinID:
XCV64740
LinkDB
All DBs
Position
3:105146..106687
Genome browser
AA seq
513 aa
AA seq
DB search
MRLRHPLPFARRIVALAATAALTACSTLPPYSPPAVAVPAHYAGAPAAPAAQAGWHVAMP
ADAAARGAWWTVFGDADLNALEARVDVSNQTVKKAVADLQQARAMVDYQHAGFLPTITAG
VAQSRARVSQNRLGSSLAGKTTPDYQAGVAASWEPDVFGRVRDAVTGAQANAAASAADLQ
AVKLSVTAELATDYFALRSLDTQKQLLDDTVRAYADALTLLRQQLAAGAIDASAVAQAQT
QLESTRTQDTDIDASRAQLQHAIATLVGESASTFALPPRVQAFHVPAIPAGVPSQLLERR
PDIAAAERRVAAANAQIGEARAAFFPDLVLSASAGLESSFFAPWLTAPSLFWSLGPQLAG
TLFDGGRRSASLRGAHAQYDGAVADYRQTVLVAFQQVEDQLSALDALASEAGSQQRATDA
ADLSLRLTTNRFNAGAVSYLDVVTAQTIALTNRRTADQIDARRMEAAVGLLKALGGGWQA
GAGAESGAESNTGAKEHAAAVRPEPTVTQPAAG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctccgtcatccgcttccgttcgcacgtcgcatcgtcgcgctcgccgccaccgcc
gcactgaccgcctgctcgacgctgccgccctattcgccacccgccgtcgcggtgcccgcg
cactacgcgggcgcgccggccgcacctgccgcgcaggccggctggcacgtcgcgatgccg
gccgacgccgccgcgcgcggcgcgtggtggaccgtgttcggcgacgccgacctgaacgcg
ctcgaagcacgcgtcgacgtgtcgaaccagacggtgaagaaagccgtcgccgatctgcag
caggcacgcgcgatggtcgactatcagcacgccggattcctgccgacgatcaccgcgggc
gtcgcgcaaagccgcgcgcgcgtgtcgcagaaccggctcggctcgtcgctcgccggcaag
acgacgcccgactatcaggccggcgtggccgcgagctgggagccggacgtgttcggccgc
gtgcgcgatgcggtgacgggcgcgcaggcgaacgcggccgcgagcgcggccgacctgcag
gccgtgaagctgtcggtcacggccgaactcgcgaccgattatttcgcgctgcgctcgctc
gacacgcagaagcaactgctcgacgacacggtccgcgcgtacgcggacgcgctgacgctg
ctcaggcagcaactcgcggccggtgcgatcgacgcgtcggccgtcgcccaagctcagacg
caactcgaatcgacgcgcacgcaggacaccgacatcgacgcgtcgcgtgcgcagttgcag
cacgcgatcgcgacgctcgtcggcgaaagcgcgtcgacgttcgcgctgccgccccgcgtg
caggcgttccacgtgccggccattccggccggggtgccgtcgcaactgctggagcggcgg
cccgacatcgcggcggccgagcgtcgcgtcgcggccgcgaacgcgcagatcggagaggca
cgtgccgcgttctttcccgatctggtgctgtcggcgagcgcggggctcgagagttcgttc
ttcgcgccgtggctcaccgcgccgagcctgttctggtcgctcggcccgcagctcgccggc
acgctgttcgacggcggccgccgcagcgcatcgctgcgcggcgcgcatgcgcaatacgac
ggcgcggtcgccgattaccggcaaaccgtgctcgtcgcgttccagcaggtcgaggatcag
ttgtccgcgctcgatgcactcgcttccgaagccggcagccagcaacgcgcgaccgacgcg
gccgatctgtcgctgcggctgacgacgaatcgtttcaacgccggcgccgtcagctatctc
gatgtggtgaccgcgcagacgatcgcgctgacgaaccggcgcaccgccgatcagatcgac
gcgcgccggatggaggcggcggtcggcctgctgaaggcgttgggcggcggctggcaggcg
ggcgcgggcgcggaatcaggcgcggaatcgaacaccggcgcgaaggagcacgcggcggcc
gtgcggcccgaacccaccgtcacgcagccggcggccggttga
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