KEGG   PATHWAY: btax03050
Entry
btax03050                   Pathway                                
Name
Proteasome - Budorcas taxicolor (takin)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
btax03050  Proteasome
btax03050

Other DBs
GO: 0000502
Organism
Budorcas taxicolor (takin) [GN:btax]
Gene
128044512  [KO:K06698]
128044644  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
128044931  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
128044943  PSMB4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
128045005  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
128046248  PSMC2; 26S proteasome regulatory subunit 7 [KO:K03061]
128046548  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
128048506  IFNG; interferon gamma [KO:K04687]
128048576  [KO:K03064]
128052482  [KO:K02726] [EC:3.4.25.1]
128053279  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
128053808  PSME1; proteasome activator complex subunit 1 [KO:K06696]
128053967  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
128054072  PSMC6; 26S proteasome regulatory subunit 10B [KO:K03064]
128054123  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
128054217  PSME2; proteasome activator complex subunit 2 [KO:K06697]
128054311  PSMC1; 26S proteasome regulatory subunit 4 [KO:K03062]
128054624  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
128055068  PSME4; proteasome activator complex subunit 4 [KO:K06699]
128055496  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
128056296  PSMB8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
128056446  PSMB9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
128057635  POMP; proteasome maturation protein isoform X1 [KO:K11599]
128058120  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
128058173  PSMF1; proteasome inhibitor PI31 subunit [KO:K06700]
128058741  ADRM1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
128060097  PSMC3; 26S proteasome regulatory subunit 6A [KO:K03065]
128060374  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
128062298  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
128063053  PSMC4; 26S proteasome regulatory subunit 6B [KO:K03063]
128063218  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
128063343  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
128063493  PSMB10; proteasome subunit beta type-10 isoform X1 [KO:K02733] [EC:3.4.25.1]
128063955  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
128064393  PSMD1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
128064619  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
128064620  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
128064726  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
128064919  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
128065066  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
128065090  PSMC5; 26S proteasome regulatory subunit 8 [KO:K03066]
128065302  PSME3; proteasome activator complex subunit 3 [KO:K06698]
128066612  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
128066636  PSMA6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
128067504  PSMA8; proteasome subunit alpha-type 8 [KO:K02731] [EC:3.4.25.1]
128068761  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 isoform X1 [KO:K03039]
128068797  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
btax04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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