Burkholderia sp. CCGE1001: BC1001_3573
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Entry
BC1001_3573 CDS
T01424
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bug
Burkholderia sp. CCGE1001
Pathway
bug01501
beta-Lactam resistance
bug02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1001_3573
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1001_3573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bug02000
]
BC1001_3573
01504 Antimicrobial resistance genes [BR:
bug01504
]
BC1001_3573
Transporters [BR:
bug02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1001_3573
Antimicrobial resistance genes [BR:
bug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1001_3573
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BC1001_3573
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BC1001_3573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_10
Motif
Other DBs
NCBI-ProteinID:
ADX56986
LinkDB
All DBs
Position
1:complement(4031125..4032708)
Genome browser
AA seq
527 aa
AA seq
DB search
MQSDRIPSARTCAPRVLTLAVAVAVAGLVAACAVGPDYKRPDAGIPASYKEAAPGWKVAQ
PADQQDRGAWWTLYQDPQLDALEEKLNAANQTIAQYAAAYRQARALVGEARAAYFPTVGA
SAGATRSGNGASSSASSTTASRSGVYNSYNLQLDATWEPDLWGSVGRSVNAQKAGQQSAA
ADLANARLSAQATLAQTYFSLRALDANQKLLDETVAAYQRSLQLTQNQYAAGVAARSDVI
QAQTQLQSAQASAIDNGVQRAQDEHAIAVLVGEPASSFSLPPMPLTATPPAVPAQVPSAL
LERRPDIASAERKAAAANEQIGIAIAAFFPSLTLSATGGFQSSVFSQLLTVPSRFWTVGP
QLAATLFDAGLRRAKTEAARAAYDESVATYRQTVLTAFQDVEDNLASQRILEREIVVQQQ
AVESARQALAIVTNEYKAGTVGFLNVLTAQTTAFTAEQKLQTIAGQRMVSSVGLVKALGG
GWDVSQMNRETGDVAAPAPLPSSASAPAATPVAQSGEASPQIEAQSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgaccgaatcccgtccgcgcggacatgtgcgcctcgcgtcctgactctcgcg
gtagcagtggccgttgccggtctcgtcgccgcgtgcgcggtcggccccgactacaagcgc
ccggacgccgggattcccgcgtcctacaaggaagccgcccccggctggaaagtcgcgcaa
ccggcggaccagcaggaccgcggcgcgtggtggaccctctaccaggacccgcagctcgac
gcactggaagagaagctgaacgccgccaaccagaccatcgcgcaatatgccgccgcctac
cggcaggcgcgcgcgctggtgggcgaggcgcgcgcggcctactttccgactgtcggcgcg
tcggcgggcgccacgcgctcgggcaacggtgcttcgtcgagcgcaagttccaccacggcc
agccgctcgggcgtctacaacagctacaacctgcaactcgacgccacctgggaacccgac
ctgtggggctcggtcggccgctcggtcaacgcgcagaaggccggccagcaaagcgccgcc
gccgatctcgccaacgcgcgcctgtcggcgcaggccacgctcgcgcaaacctacttctcg
ctgcgcgcgctcgacgccaaccagaaactgctcgacgagaccgtcgccgcctatcagcgc
tcgctgcaactcacgcagaaccagtacgccgcgggcgtggcagcgcgctcggacgtgatc
caggcgcagacgcagctgcaatcggcgcaggcgtccgcgatcgacaacggcgtgcagcgc
gcccaggacgagcatgccattgcggtgctagtcggcgaaccggcctccagcttctccctt
ccgcccatgccgctcaccgcgacgccgcccgccgtgcccgcgcaggtgccgtcggcgctg
ctcgaacggcggcccgacatcgcgtcggcggaacgcaaggcggcagcggcgaacgagcag
atcggcatcgccattgccgcgttttttccgtcgctgaccttgtcggcgaccggcggcttc
cagagttcggttttctcgcagttgctgaccgtgccgtcgcgcttctggaccgtcgggccg
caactcgcggcgaccctgttcgacgccgggctgcgccgcgcgaaaaccgaagcggctcgc
gcggcttatgacgagagcgtcgccacgtatcgtcaaacggtgctcacggcgttccaggac
gtcgaggacaacctcgcgtcccaacgcatcctcgaacgggaaatcgtggtgcagcagcag
gccgtggagtcggcgcgccaggcgctcgccatcgtgacgaacgaatacaaggcgggcaca
gtcggctttctcaacgtgctgaccgcgcaaaccactgcgttcacggccgagcagaagctg
cagaccattgcggggcagcggatggtgtcgtcggtcgggctggtgaaggcgctcggcggc
ggctgggacgtctcgcagatgaaccgcgaaaccggcgacgtcgcggcgcctgcgcctttg
ccgtcatccgcttcggcgccagcggcgactccggttgcacaatccggcgaagcctcgccg
cagattgaggcgcaaagccggtaa
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