Burkholderia sp. YI23: BYI23_B005350
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Entry
BYI23_B005350 CDS
T01711
Symbol
nodT
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
byi
Burkholderia sp. YI23
Pathway
byi01501
beta-Lactam resistance
byi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BYI23_B005350 (nodT)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BYI23_B005350 (nodT)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
byi02000
]
BYI23_B005350 (nodT)
01504 Antimicrobial resistance genes [BR:
byi01504
]
BYI23_B005350 (nodT)
Transporters [BR:
byi02000
]
Other transporters
Pores ion channels [TC:
1
]
BYI23_B005350 (nodT)
Antimicrobial resistance genes [BR:
byi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BYI23_B005350 (nodT)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BYI23_B005350 (nodT)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BYI23_B005350 (nodT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7056
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AET91142
LinkDB
All DBs
Position
2:633731..635179
Genome browser
AA seq
482 aa
AA seq
DB search
MQALLPSLRVAIERKWTVLPALAAAALLAGCIDTKVPTYQRPDTPEKTSFSKIDAPKVAP
ADTIQPDWWKQFQDPYLDSLVEKAISSNFDIKVLAARIQVAGAQIGEARAGALPSMDLGA
GASFEKTTGQQFSKQYNLATQVSWDIDIWGTVEKGVQAQKAEFRATEADWRAGYLELVAL
VSTTYFQILQFDDQIQQQKQTIATNQQILTIFEGMQKNGLVPKTQVLTQRAELNRLTREL
LELRRARDLANNALSTLIGVPAGEFKMPDGKLQKRVQPPPVPSGLPSQLLARRPDLIAAE
YRVLEAYDLVGQAKLAQLPTINLTGRAGSASFQLTDLLKMFTLSFVPSINIPILDPAVRA
RVKTTEAQTGVAEQQYRSTVMNAFEEVENALVNLDSHMKQRVELQQEVDQLSVVAAQIDA
QLKEGVISQLQVFETERTLLAAQLALLANHQQILSDTVTLYKALGGGWPTVDVQAVSKDG
LK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagccttgttgccatcgttgcgcgtcgccatcgagcgaaaatggaccgtattgccg
gcgctggccgccgccgcgctgctcgccggctgcatcgacacgaaggtgccgacgtatcag
cgtcccgacacgcccgagaaaacatccttctcgaagatcgacgcgcccaaggtcgccccc
gccgacaccatccagccggactggtggaagcagttccaggacccgtatctcgactcgctc
gtcgagaaggccatcagcagcaacttcgatatcaaagtgctggccgcgcgcattcaggtg
gcgggcgcgcagatcggcgaggcgcgcgcgggcgcgttgccgtcgatggatctcggcgcg
ggcgcgagcttcgaaaagacgaccggccagcagttctccaagcaatacaacctggccacg
caagtgagctgggacatcgacatctggggcacggtggagaagggcgtgcaggcgcagaag
gccgaattccgcgcgaccgaggccgactggcgcgcgggttatctcgaactcgtcgcgctc
gtatcgacgacgtacttccagattctccagttcgatgaccagatccagcaacagaagcag
accatcgcgaccaaccagcagatcctgacgatcttcgaaggcatgcagaagaacggtctc
gtgccgaagacgcaggtgttgacgcaacgcgcggaactcaaccgcctgacgcgcgagctg
ctcgaactgcgccgcgcgcgcgatctcgccaacaacgcgctttcgacgctgatcggcgtg
cccgccggcgaattcaaaatgcccgacggcaagctgcaaaagcgcgtgcagccgccgccg
gtgccgagcgggttgccgtcgcaattgctcgcgcgccgtcccgatctgatcgcggccgaa
tatcgcgtgctcgaagcgtatgacctcgtcggccaggcgaagctcgcgcaactgccgact
atcaatctgactggacgcgcgggctcggcgagctttcaactgaccgatctgctgaagatg
ttcacgctgagcttcgtgcccagcatcaatattccgattctcgatccggccgtgcgcgca
cgcgtgaagacgaccgaagcgcagaccggcgtcgcggaacagcaataccgcagcacggtg
atgaatgcgttcgaagaagtggagaacgcgctcgtcaatcttgactcgcacatgaagcag
cgcgtcgagctgcaacaggaagtcgatcagttgagcgtggtggccgcgcagatcgacgcg
caactgaaagagggcgtgatttcgcagcttcaggtgttcgagacggaacgcacgttgctc
gccgcgcaactcgcgctgctcgcgaatcatcagcagattctttccgacaccgtgacgctg
tataaggcgctcggcggcggctggccgacggtggacgtgcaggccgtgagcaaggacggc
ttgaagtga
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