Capnocytophaga sp. oral taxon 902: HW278_00020
Help
Entry
HW278_00020 CDS
T08773
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo01501
beta-Lactam resistance
capo01503
Cationic antimicrobial peptide (CAMP) resistance
capo02020
Two-component system
capo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HW278_00020
09132 Signal transduction
02020 Two-component system
HW278_00020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HW278_00020
01503 Cationic antimicrobial peptide (CAMP) resistance
HW278_00020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
capo02000
]
HW278_00020
02044 Secretion system [BR:
capo02044
]
HW278_00020
01504 Antimicrobial resistance genes [BR:
capo01504
]
HW278_00020
Transporters [BR:
capo02000
]
Other transporters
Pores ion channels [TC:
1
]
HW278_00020
Secretion system [BR:
capo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HW278_00020
RTX toxin transporter
HW278_00020
Multiple protein transporter
HW278_00020
RaxAB-RaxC type I secretion system protein
HW278_00020
Antimicrobial resistance genes [BR:
capo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HW278_00020
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HW278_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3231
DUF2756
Motif
Other DBs
NCBI-ProteinID:
QLF49200
UniProt:
A0A7H8YRV6
LinkDB
All DBs
Position
complement(4119..5417)
Genome browser
AA seq
432 aa
AA seq
DB search
MMKKLFFLLCLLPFSVVAQKLWTLSDCIQYAKENNLSIKQSEIDLKATDIDKMQAKAGFL
PSVNGNASYNLNEGKNINPVTNQFENAFFQSASGGVSVDLTLFAGLQNWRKLHQAELNRI
ASQYQLDKMKDDIVLMIINAYAEVLSNKEQIKNLKAQLEISKESLTRTRELIGAGSLPKG
DIYEAEAQLLTQEQQIIATENALFIAKMGLAQLLLLKNYRDFDIADSAFEQPSADILNRT
PEEIYERAKEVMSDVKLAEANMQVAQNSLRLSQSAYSPRLSAQWGYSSRWSKNQSQDFWQ
QLDANKGMYAGLSLNIPIFNGFSTLGTVKRQRLNFLKSQFAKEQAELTSEKNIYQAYNDA
SNAKKLYEASEKTVQAKQQAFSYAQERHNVGLMNTFDFSQAKYQYENAQNDFVKAKYQYI
FKLKVLEYYFSH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaagttattttttttactttgtttactgcctttttcagtagtagcacaaaaa
ctgtggacattaagcgactgtattcagtatgccaaagaaaataacctatctattaaacaa
tcggaaatagatttgaaagccacagatattgataaaatgcaagccaaagcaggtttcttg
ccctcggtgaatggcaacgcatcttataacttaaatgagggaaaaaatattaatcctgta
accaatcagtttgaaaatgctttctttcaatcggcatcaggaggggtaagcgtagatctt
actctttttgcaggactacaaaattggcgcaagttacatcaggcggaacttaatcgtata
gcttctcaatatcagttagataaaatgaaagacgatatagtactgatgattatcaatgcc
tatgccgaagtgttgagcaataaagaacaaatcaagaatttgaaagcacagttagaaatt
tcaaaggaaagtttaacgcgcacccgtgaacttattggtgcaggttctttacccaaagga
gatatttatgaagccgaagcacaactgctcacacaagaacagcaaataatagctactgaa
aacgctctctttattgccaaaatgggtttggcacaattacttttgttaaaaaactatcga
gattttgatattgcagatagtgcttttgagcaaccttctgctgatattctcaatagaact
cctgaagagatttatgagcgtgccaaagaggtaatgagcgatgtaaaattagccgaagca
aatatgcaagtagctcaaaatagtttgcgcttatcacagtcggcttattcaccacgtctt
tctgctcaatgggggtatagttcacgatggagtaagaatcaatcgcaagatttttggcaa
cagcttgatgctaataaaggtatgtatgcagggttatcgcttaatattcctatttttaac
ggattttcaactttgggaactgtaaaacgtcagcgattaaattttctaaaaagtcaattc
gctaaagaacaagcagaacttacttctgagaagaacatttatcaagcctataatgatgct
tcgaatgctaaaaagctatatgaagctagtgaaaagacggtacaagcaaaacaacaggcg
tttagttatgcgcaagagcgtcataatgtaggcttaatgaatacttttgattttagtcaa
gctaaatatcagtatgagaatgctcaaaacgattttgttaaagccaaatatcaatatatt
tttaagttaaaagtattagaatattattttagtcattaa
DBGET
integrated database retrieval system
