Cygnus atratus (black swan): 118245899
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Entry
118245899 CDS
T09349
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118245899
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cata01002
]
118245899
Enzymes [BR:
cata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
118245899
Peptidases and inhibitors [BR:
cata01002
]
Metallo peptidases
Family M10
118245899
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Astacin
Reprolysin_4
Peptidase_M54
DUF4953
Peptidase_M66
Reprolysin_2
DUF6196
Motif
Other DBs
NCBI-GeneID:
118245899
NCBI-ProteinID:
XP_035398378
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Position
1:194134257..194141181
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AA seq
466 aa
AA seq
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MKFLSLLLLLSVAVSSAFPVGPEAEDEGQTINLVETYLQNFYNLQIDHHPHVRQRGKNHL
VEKLKEMQEFFGLQVTGKPDLETLEMMNKPRCGVPDVQQYMFTPGNPKWKRNNLTYRIVN
YTRKMRQTDVDEAIQKALNVWSSVTPLTFQKTEDKDADIVISFAYRDHQDNSPFDGPNGQ
LAHAFQPGEGIGGDVHLDEEEAWSKDARGYNLFIVVAHELGHSLGLSHSNDPGALMYPTY
AYTDPNEFILPQDDIDGIQAIYGQTNAAVQPTGPKTPQACDPNLTFDAITTLRGELMFFK
GRYMLRKHPERAETELNFISLFWPKLPSGIQAAYENIEKDEVLLFKEDKYWVIRGYDIPH
GYPKPIYRLGFPKTVKRVNAAYSDETTGKTYFFVADRYWRYDENKKSMDQGYPRKIVHDF
GKIGRVDAAFQTDGYVYFFHGTTQFQFDPRSKRIVSQRKSISWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctttcgcttctcctgttgctgtctgtggctgtctcctctgctttccctgtg
ggtccagaagcagaagatgaaggacaaaccataaatcttgtggagacgtatctacagaat
ttctacaatcttcaaatagatcaccatcctcatgtaagacagaggggtaaaaatcacctt
gttgaaaagctcaaggaaatgcaagaattctttggactacaggtgactggaaaacctgat
cttgaaactttggagatgatgaataaacccagatgtggtgttcctgatgttcagcaatat
atgttcacaccagggaatccaaaatggaagagaaataatctgacatacaggattgtgaat
tacaccagaaagatgagacaaaccgatgtagatgaagcaatccaaaaagctctgaatgtc
tggagcagcgtgacaccattgacattccaaaagactgaggacaaagatgcagatatagtg
atctcttttgcttatagagatcaccaggacaactctccttttgatggccccaatgggcag
ctggctcatgcttttcaaccaggtgaaggtattggtggagatgtgcatcttgatgaggag
gaagcctggtcaaaagatgcaagaggatacaacttgttcattgttgttgcccatgagctt
ggccattcactgggtctgtcccattcaaatgatcctggagcactgatgtatccaacttat
gcctacacggaccccaatgaattcattcttcctcaggatgacattgatggcattcaagct
atatatggacagactaatgctgctgtgcagcctacagggcccaaaactccacaagcctgt
gaccccaatttgacatttgatgctattactaccttgcgtggagaattaatgttcttcaag
ggcagatatatgctgcgcaaacatcctgagagggcagagacagagctcaattttatctca
ctgttctggccaaaactgccatcaggaattcaagctgcctatgagaatattgaaaaggat
gaagttttactttttaaagaggacaaatattgggttatcagaggatatgacattccacat
ggttatcctaaaccaatctatcgcttggggttcccgaagactgttaaaagagttaatgca
gcttacagtgacgagaccacaggaaaaacatatttctttgtagctgacagatactggaga
tacgatgaaaacaaaaaatccatggatcaaggttatcccaggaaaatagtccatgacttt
ggaaaaataggcagagttgatgctgctttccagactgatggctatgtctacttcttccat
ggaacaactcagttccagtttgatcctcggtccaaacggattgtcagtcaaaggaagagc
atcagctggtttaattgctaa
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