Cygnus atratus (black swan): 118258445
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Entry
118258445 CDS
T09349
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04622
RIG-I-like receptor signaling pathway
cata04623
Cytosolic DNA-sensing pathway
cata05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118258445 (ADAR)
04623 Cytosolic DNA-sensing pathway
118258445 (ADAR)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118258445 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cata03041
]
118258445 (ADAR)
Enzymes [BR:
cata01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
118258445 (ADAR)
Spliceosome [BR:
cata03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118258445 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
TrmB
MarR
IF2_N
Motif
Other DBs
NCBI-GeneID:
118258445
NCBI-ProteinID:
XP_035423139
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All DBs
Position
28:410471..423432
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AA seq
1300 aa
AA seq
DB search
MKPEPPPPPPATRYPRSAPPPPGGAARPSPRVSCPGLGHAAAMRCPARKRAPKRCVLKED
GGRAASGRSAQAQAGLGCVITVRPPRRQRRRRGRFLFRTGERRATHGFSSTAAKAARFTF
ALQQCAMNRGTARGKGSYFTGSRRNYSGTNPGFFHRPHTPQETNPDAFSRQQFLEGQDSE
VCLIQELRSYKEPRAGGWQAVAPAPAGRWQARRSRAGCHRFSNKCLRVETSSHCHPPQYH
GQENWGRDSDTISLNFQRLSLAGQNHEQEILNIFRQLGVGKTCTVYDLARKLKTRKKEVN
RVLYKLLKEGKLHKGEETPPLWRIASPSAGRERNPPEHGGGSAASASESRGERSAAGSRD
ISPTMAETKDKICNYLFGVAETTALNLAKNIGFSKAKDVNAFLSALEKLGDVHKENSNPP
RWSLTDRKRERMQMRLKGSTATRRADPTPGSSLPSSSVPPDPREMTVAVASPAAGSSIEN
GQQPLGQTGQSSDSDTEAAVPEDTKPVFSSFSTYDSSENGRWASDDIPDNLNTINKQPEE
SESIMNSQASPSYAAQFDTGFPCTPVEKLMACQEKNPVSGLTEYSQYTSQHCEFDMLEQS
GPSHEPRFKFQAVISGRRFPPAEAGSKKLAKQEAAANAMKVLMQEAENGRPDGIKCEEQI
PSNSSESELPLHSEPESSSAPAQLNMLPGKHPISILMEYGQKSGNMIEFQLLSQDGPPHD
PRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVAMKILSGEPVPRVSPEQPVVKPQGEQST
RGCGAQVIAPDESKAAKAKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHD
PKFVYQAKVGGRWFPAVTAHSKKQGKQEAADAALRVLIGETEKAERMEGINITEQSWSAS
PFQLPVSGSTLHDQLAMLSHQCFNALTARIQHSLLGRKILAAIIMRRGNNDLGVVVSIGT
GNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYDPSNPSSAKESIFEPAGKK
RLKIKSNVTFHLYVSTAPCGDGALFDKSCSDQASVVGQAQHQPLFENPKQGKLRTKVENG
EGTIPVKSSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFIEPVYLSSVTL
GYLYSQGHLTRAICCRMVRDGDVLQKKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVN
WCLADESEVEVLDGTKGKVDGPKLEVSRVSKRKTFALFQQLCAKNNCKDLQKLLVYSEAK
EAATSYQEAKQCFFSVLEEMGYGSWIRKPQEEDNFSFLDA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggagccgccgccgccgccccccgccacgaggtacccccgcagcgccccaccc
ccccccggcggagcggcccggccgagccctcgggtgtcgtgcccgggcctcggccacgcc
gcggcgatgcgttgccctgcccgaaagcgggccccgaagcgctgtgtcctgaaggaagat
ggcggccgcgcggcctcggggcgttccgcgcaggcgcaggcggggctcggctgcgtcatc
accgtgcgcccgccgcggcgccaacggcggcggaggggcaggttcctgttcaggactgga
gaacgccgagcgacccacggcttctcttctaccgctgcgaaggcagcccggttcaccttc
gcgctccagcagtgcgctatgaacagaggcaccgctcgaggcaaaggctcgtattttacc
ggttcaagacgtaactactccggcactaatccaggtttctttcaccgcccccatacccca
caggaaactaacccagacgccttttcacgacagcagttcctagaagggcaggacagcgaa
gtctgtttaattcaggagctgcgatcgtacaaggaaccgcgcgccggaggctggcaggct
gtggcaccggctcctgcagggagatggcaagccaggcgcagcagagcgggatgccatagg
ttctccaacaagtgcctgcgggtggaaacttcatcgcattgtcaccctcctcagtaccac
ggtcaggagaactgggggagagattctgacaccataagtctgaatttccagcgactgtct
cttgctgggcagaaccatgaacaggaaattctgaatatcttcaggcagcttggggtgggg
aagacttgtacggtttatgatcttgcacggaagcttaaaacccgaaagaaagaagtcaat
cgtgttttgtacaagctcctcaaagaaggcaaactgcacaaaggtgaagagacgccgcca
ctgtggaggattgccagcccaagcgcggggagagaaagaaaccctccggagcacgggggg
ggcagcgcggcctcagcttctgagagcagaggggagaggagcgcggccggctcgagagac
atcagccccacgatggctgagacaaaggacaaaatctgcaactacttgttcggagtggca
gaaacgacggcgctcaaccttgccaaaaacattggcttttcgaaggccaaggacgttaac
gcctttctcagcgccctggagaagctgggcgatgtccacaaggaaaactcgaaccctcca
cggtggtccctgacggacaggaaacgcgagcggatgcagatgcggctgaagggcagcaca
gcgaccagaagagcagatcccacacctgggtcgagtttgccatcttcctccgttcctcca
gacccccgggagatgaccgtggctgtagcttcgccagcggcaggatcgagtatagagaac
ggacagcagcctctgggacagactggtcagagcagtgacagtgacacagaagcagccgtg
ccggaggacaccaagcccgtcttttctagcttcagtacctacgacagctctgaaaatggc
aggtgggcttcggatgacatcccagacaacctgaacactatcaacaagcagcctgaggag
tcggagtccatcatgaactcccaggcttcccccagttacgccgcccagtttgacactggt
ttcccgtgtacgcctgtcgagaaactaatggcttgtcaggagaagaacccagtgagtggc
cttaccgaatattcccagtacacctcccagcactgtgagtttgacatgctggagcagagc
gggccctctcacgagccacgatttaagttccaggcagtgatcagcgggcgccgattccca
ccagcagaagcagggagcaaaaagcttgctaagcaggaggcagcagctaatgctatgaag
gtgctgatgcaagaagcagagaacggaaggcccgatggaattaaatgtgaagagcagatt
ccatccaacagttctgaatcagaactgcctttgcattcagagccagagtcatcgtctgcg
ccagctcaactgaacatgcttcccgggaagcaccccatcagcatattaatggaatacgga
caaaaatcagggaacatgattgaattccagctgctctctcaggatggcccacctcatgat
cctaggttcagctactgtgtgaaaatgggtgaccaaattttccctgctgtggtaggaaac
agcaagaagggagcaaagcaaatggcagcagaagttgccatgaagattctttctggagag
cctgtgccacgtgtctcaccggaacagcctgtcgtgaagccccagggtgagcagtccacg
cgcggctgtggagcacaggtcatcgctccggatgaatccaaggcagcaaaagcgaagggt
gttggggagctcatcaaatacctgaacgtcaaccctgtcagcggcctgctggagtacgcc
cgctctaatggctttgctgcagagttcaaactcattgaccagtcgggacctccccacgac
ccaaagtttgtctatcaggcgaaggttggaggccgctggttcccagctgtaactgcacac
agtaaaaaacagggcaagcaggaggcagctgacgcagcactcagagtcctgatcggggaa
acggagaaggctgagcgcatggagggaatcaacatcacagagcaatcctggtctgcgtcc
ccgttccagctccctgtaagtggcagtaccctccacgatcagctggccatgctgagccac
cagtgcttcaatgccctcactgctcgcatccagcacagcctgcttgggcggaagatcctg
gctgccatcatcatgcggaggggaaacaacgacctgggagttgtggtcagcatcggaaca
ggtaatcgatgtgtgaaaggagaagaactgagcttgaagggggagactgtgaatgactgt
catgcggaaatcatttctcgaagaggttttgtgaggtttctctatagtgagctgatgaag
tatgacccgtctaatccttcttctgcaaaagagagcatttttgagccagcggggaagaag
agactcaaaataaagagcaatgtcacctttcacctctatgtcagcacagcgccttgtggg
gacggggcactctttgataaatcctgcagcgatcaggcgagcgtggtggggcaagcccag
catcagcctctctttgagaaccccaagcaaggcaagctgcggaccaaggtggagaacggg
gaaggtaccattcccgtgaagtcgagtgacattgtgccaacttgggatgggatccagcat
ggggagaggctgcgcaccatgtcctgcagtgacaaaatcttacgctggaatgtactcggt
ttgcaaggagcgttgctgtcacacttcatagagccagtttatctcagctctgttacgctt
ggttacttgtacagccagggccatttgacgcgtgcaatctgctgccgcatggtgcgagat
ggggacgtgctgcagaagaagctccaggctccgtatcacatcaaccaccctgaggttggg
cgagtcagcgtatatgactctgcaaggcagacgggcaagacgaaggagtcttcggtgaac
tggtgtcttgctgatgaaagcgaagttgaagtcttggatggcacaaaagggaaagtagat
ggaccgaagctggaggtgtctcgtgtgtcgaagaggaaaacgtttgccctcttccagcag
ttatgtgccaagaacaactgcaaagacttgcagaagctcttggtgtactcagaagctaag
gaggcagccacgtcgtaccaagaagctaagcagtgcttcttcagcgtgctggaagagatg
ggctatggcagttggatccgcaaaccccaagaggaagataatttctctttccttgatgca
taa
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integrated database retrieval system
