Cognaticolwellia beringensis: B5D82_12660
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Entry
B5D82_12660 CDS
T05628
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
cber
Cognaticolwellia beringensis
Pathway
cber01501
beta-Lactam resistance
cber01503
Cationic antimicrobial peptide (CAMP) resistance
cber02020
Two-component system
cber03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cber00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B5D82_12660
09132 Signal transduction
02020 Two-component system
B5D82_12660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
B5D82_12660
01503 Cationic antimicrobial peptide (CAMP) resistance
B5D82_12660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cber02000
]
B5D82_12660
02044 Secretion system [BR:
cber02044
]
B5D82_12660
01504 Antimicrobial resistance genes [BR:
cber01504
]
B5D82_12660
Transporters [BR:
cber02000
]
Other transporters
Pores ion channels [TC:
1
]
B5D82_12660
Secretion system [BR:
cber02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
B5D82_12660
RTX toxin transporter
B5D82_12660
Multiple protein transporter
B5D82_12660
RaxAB-RaxC type I secretion system protein
B5D82_12660
Antimicrobial resistance genes [BR:
cber01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
B5D82_12660
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
B5D82_12660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FIVAR
YwqH-like
Motif
Other DBs
NCBI-ProteinID:
ASP48543
UniProt:
A0A222GA79
LinkDB
All DBs
Position
complement(2986979..2988340)
Genome browser
AA seq
453 aa
AA seq
DB search
MKKTITALFIGFACAASSSLANAEDLLSVYQQAKNNDPVVLRAHAQFLATEEGIEQARAI
LLPQLSASASYTESESEFIPTSDTGQSSGLLLTNKSDTTRYGINLDMQLYNHSSWLKLDN
AKKVAHQSDVTYQLAKQDLIVRVTQAYFQVLSAKDDLEFSIAEKTAIERQLEQTKQRFSV
GLTAVTDVHEAQAQYDNAVTDEIRAENKVFNAEEALRVITNIYPRDLNILNTERFSTSRP
FPDSANEWQQTAEAKNLELIAERISIDIAKENINIARSGHYPTLSLTGSYGSSDQDNEVN
GTNFNNPSLDSHSIGIALSVPIYSGGGITSSVRQAQSNYVAASQNMEQAYRNVVRNTRNA
YNTVIAAVSAIRSLEQSVVSAQSALKATEAGFEVGTRTIVDVLNSTRNLYNAKRNLSSTR
YDYIQNVLALKRAGGTITEQDLADINQGLTATL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaataaccgcactatttattggctttgcatgtgctgcaagtagctcttta
gctaatgccgaagatttactgtcagtatatcagcaagcaaaaaacaatgatccggttgtt
cttagagcgcatgcgcaatttttagcgacagaagaaggtattgaacaagcgagagctata
ttattgccacaattaagtgcatcagcaagctatacagaaagcgaaagtgaatttattcct
acatcagatactggccaatcatcaggcctacttctgacgaataaaagtgatacgactcgc
tacggtattaatttagacatgcagttatataatcatagctcttggttaaaactcgataat
gccaagaaagttgcccaccaaagtgatgttacttatcagttagccaaacaagatttaatt
gtccgcgtaacgcaagcatattttcaggtattaagcgctaaagatgatttagagttttcc
attgctgaaaaaacagctatcgaacgccagttagaacaaactaaacaaagattctctgtt
ggtttaactgcggttaccgatgttcatgaagcacaagcgcaatatgacaatgccgtaacg
gatgaaatcagagcagaaaataaagtatttaatgccgaagaagctttacgtgttatcacc
aatatttatcctcgtgatttaaatattctaaatactgagcgctttagtacctctcgtcca
tttcctgatagtgctaacgaatggcaacaaactgcagaagctaaaaacctagaattaatc
gcagaaagaataagtattgatattgccaaagaaaatattaacattgctagatctggtcat
taccctacattaagcttaactggcagctacggtagcagcgatcaagataatgaagtcaac
ggtactaattttaataacccatcactagatagtcactcaattggcattgctttatctgtg
cctatttattccggcggcggaataacaagcagtgtacgtcaagcacaaagcaactatgtt
gccgcgagccagaatatggaacaagcatatcgcaacgtagtacgaaacacacgtaacgca
tataatacggtaatcgcagcagtatcagccatacgttcattagagcaatcagtagtgagc
gcacaaagcgcattaaaagcaactgaagcaggctttgaagtgggtacacgtactattgtt
gatgtacttaacagcaccagaaacctatataacgccaagcgtaacttatcttctactcgt
tatgattacattcaaaatgtattagcactaaaacgcgctggcggaacgattactgagcaa
gatttagcggacattaaccaagggttaacggccacgctataa
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