Cupriavidus basilensis: RR42_s1925
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Entry
RR42_s1925 CDS
T03642
Name
(GenBank) Type I secretion system, outer membrane component LapE
KO
K12340
outer membrane protein
Organism
cbw
Cupriavidus basilensis
Pathway
cbw01501
beta-Lactam resistance
cbw01503
Cationic antimicrobial peptide (CAMP) resistance
cbw02020
Two-component system
cbw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RR42_s1925
09132 Signal transduction
02020 Two-component system
RR42_s1925
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RR42_s1925
01503 Cationic antimicrobial peptide (CAMP) resistance
RR42_s1925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbw02000
]
RR42_s1925
02044 Secretion system [BR:
cbw02044
]
RR42_s1925
01504 Antimicrobial resistance genes [BR:
cbw01504
]
RR42_s1925
Transporters [BR:
cbw02000
]
Other transporters
Pores ion channels [TC:
1
]
RR42_s1925
Secretion system [BR:
cbw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RR42_s1925
RTX toxin transporter
RR42_s1925
Multiple protein transporter
RR42_s1925
RaxAB-RaxC type I secretion system protein
RR42_s1925
Antimicrobial resistance genes [BR:
cbw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RR42_s1925
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RR42_s1925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AJG23513
UniProt:
A0A0C4YKB9
LinkDB
All DBs
Position
secondary:2113251..2114789
Genome browser
AA seq
512 aa
AA seq
DB search
MRKRDSLVIPLSLIAATLAGCATSSLHLAPAQADRPWQPATTASGDIVPGAAARAAPAPG
PSDYTLPANSALASIAPPPALDPAHAYSLPELIDMAESANPLTRIAWNDARNAALAAGIA
KASYLPHISAAAMGGYQTGHLSTSTPLGSAGTNTSTHGAVSVLSLQWLLFDFGERVGIVD
AAEQTSIAVNIAFTAVHQRIVHDVSVAFYRYQAARSRGGTVQQAMTNADAVLAAAKARYQ
RGIGTIVEVAQATQNRAQTNLAMVQAQGAETDAYLALLAAIGISPLSKPRIAEMPVRPLS
PALRGSIEQIVESAIAQRPDVLGAYAVERASQAKVKAAEAAFLPKVFLSAYTSYASGGSS
ISAIPPIGQQPPTLNLNGYRYGASVFLGVSVPIYDGGVRSAVVAQSRNDVDSASARLTRA
KEESVRQVVVSQSALESSLAAYDAAKALADAAQVTYNAAFAAYSKGVGSIIEANLAQNQL
LLAWNASTDAYSGALAAAATLALATGAIGSTR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaacgtgattcgctggtgattccgctatcgctgattgccgcgacgctggcaggt
tgtgccacgtcgtcgctgcatctcgcgcctgcgcaagccgatcggccgtggcagcccgcc
accacggcgtcgggagacatcgtgcctggcgccgcggccagggccgcacccgcgccaggg
ccttccgactacacgctgcccgccaattcggcgctcgcatcgatcgcaccgccgccggcg
cttgatccggcgcacgcgtactcgctgccggaactgatcgacatggccgagtccgccaac
ccgctgacgcgcatcgcgtggaacgacgcacgcaatgcggcgctggccgcgggcatcgcc
aaggccagctacctgccgcacatctcggccgcagccatgggcggctaccagaccgggcat
ctttccaccagcacgcccctgggatcggccggcacgaacacatccacccacggcgcggtg
tcggtactgtcgctgcaatggctgctgttcgatttcggtgaacgcgtgggaattgtcgat
gccgcggagcaaacttcgatcgccgtcaatattgcgttcacggccgttcaccagcgcatc
gtgcacgatgtcagcgtggcgttctatcgctatcaggctgcccgatcgcgcggcggcacg
gtgcagcaggccatgaccaacgccgatgccgtgctcgcggcggccaaggcacgctaccag
cgcggcatcggcacgatcgtggaagtggcgcaggccacccagaaccgtgcgcagaccaac
cttgcgatggtgcaagcacaaggcgccgagaccgacgcgtatctggccctgctcgcggcc
atcggtatctcgccgttgtccaagccacgcatcgccgaaatgcccgtgcggcccttgtca
ccggccttgcgcggctccatcgagcagatcgtcgaaagcgcgatcgcgcagcggcccgac
gtgctgggcgcctacgcggtcgagcgcgccagccaggccaaggtcaaggcggccgaggcg
gcattcctgcccaaggtgttcctgtccgcgtacacgtcatatgcatcgggtggatcgtcc
atctcggcgatcccgccaatcggccagcagcccccgacgctgaacctcaacggctatcgc
tacggcgccagcgtattccttggcgtttccgtgcccatctacgacggcggggtgcgctcg
gcggtggtcgcgcagtcacgcaatgacgtcgacagcgcatcggcccggctgacgcgggcc
aaggaagaatcggtgcggcaagtggtggtcagccagagcgcgctcgaatcgagcctggcg
gcgtacgacgcggccaaggcgctggccgacgccgcccaggttacctacaacgcggccttt
gcggcgtatagcaagggcgtgggatcgataatagaagccaacctggcgcaaaaccagttg
ctgctggcgtggaacgcgtcgaccgatgcgtatagcggcgcgctggccgccgccgccacg
ctggcgctcgcgaccggggcgatcggctcgacgcgttga
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