Cervus canadensis (wapiti): 122449754
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Entry
122449754 CDS
T07554
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03320
PPAR signaling pathway
ccad04657
IL-17 signaling pathway
ccad04926
Relaxin signaling pathway
ccad05171
Coronavirus disease - COVID-19
ccad05200
Pathways in cancer
ccad05219
Bladder cancer
ccad05323
Rheumatoid arthritis
ccad05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
122449754
09152 Endocrine system
03320 PPAR signaling pathway
122449754
04926 Relaxin signaling pathway
122449754
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122449754
09162 Cancer: specific types
05219 Bladder cancer
122449754
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
122449754
09163 Immune disease
05323 Rheumatoid arthritis
122449754
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122449754
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122449754
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
122449754
Peptidases and inhibitors [BR:
ccad01002
]
Metallo peptidases
Family M10
122449754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Peptidase_M66
Reprolysin_2
Peptidase_M54
Metallopep
DUF4953
Motif
Other DBs
NCBI-GeneID:
122449754
NCBI-ProteinID:
XP_043337668
LinkDB
All DBs
Position
11:4482666..4491111
Genome browser
AA seq
466 aa
AA seq
DB search
MPRLPLLLLLLGCLGSHGFPATSETQEQDMEMVQKYLQNYYSLEVGTSRFERQRNHGSMI
EKLKQMQEFFGLKVTGKIDADTLDIVRKPRCGVPDVSSPYELTPGNPRWLSTHLTYRVEN
YTPDMSRADVEQAVRKAFQLWSSASPLTFTKVSEGQADIMISFVWRDHRDNSPFDGPGGV
LAHAFQPGIGIGGDVHLDEEETWTKDLNGYNLYWVLAHELGHSFGLSHSTNMGALMYPNY
IYTGEVYLSQDDIKGIQAIYGPPNKLQLVPVLPTPQPCDNWITFDAVTKIRGELFFFKDR
FIIRVHPYYPGVEVVLISAFWPDLSSGIEAAYDVPKKDEALFFKGNKYWVARGGVILRSY
PRDIYSSFGFPRWVRNVDAAVHEEETGKTYFFVDNEYWRYDENRESMDAGYPREIAEDFP
GISGKVDAVFEHEGNFYFFQGSTQYKFDPKTERILAFLDANSWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccttcccctgctgctgctgctgctcgggtgcctggggtctcatgggtttcca
gccacttcagaaacacaagagcaagacatggagatggtccagaaatacctacaaaactat
tatagcttagaggttggaaccagccgattcgaaaggcagagaaaccatggttcaatgatt
gaaaaattaaagcaaatgcaggaattctttgggctaaaagtgactggaaagatagatgct
gataccctggatattgtgaggaagcccagatgtggagtgcctgacgtctcatccccgtat
gaactcactccagggaaccctcgttggctgagcacacacctgacctacagggttgaaaat
tacaccccagacatgtcgagagcagacgtggagcaggctgttaggaaggcctttcagctc
tggagcagtgcctcacccctgaccttcaccaaggtctctgaggggcaagcggacataatg
atatcctttgtctggagagatcatcgtgacaactctccctttgatggacctgggggtgta
ctcgctcatgcgttccaaccaggaataggtattggaggagatgttcatcttgatgaagag
gaaacatggaccaaagatttgaatggttacaacttgtattgggttttggcacatgaattg
ggccattcctttggactttctcattctactaacatgggggctttgatgtaccccaactac
atctacactggtgaagtttatctgtctcaggatgacatcaagggcatccaggccatctat
gggccacctaataaactgcagctggtcccagtgctaccaaccccccaaccctgtgataac
tggataacatttgatgctgtgaccaaaattcgtggggaattgttcttcttcaaagacagg
ttcatcatccgtgttcatccgtactacccaggggtcgaagtcgtgctcatctctgctttc
tggccagatctgtcaagtgggattgaggcagcttatgatgttcctaaaaaagacgaagcc
ctttttttcaaaggcaataaatactgggttgctaggggaggtgtgatactgcgcagttac
cccagggacatctacagttcctttggcttccctagatgggtgaggaatgtcgatgctgct
gtccatgaagaggaaaccggaaagacgtacttctttgttgacaatgagtactggaggtat
gatgaaaacagggagtccatggatgcaggttatcccagagagatagctgaagacttccct
gggattagcggaaaagttgatgctgttttcgaacatgaaggaaacttctacttttttcaa
ggatcaacgcagtacaaatttgatcctaaaacagagagaattttggctttcctggatgct
aacagctggttcaactgctga
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