Chryseobacterium capnotolerans: H5J24_02225
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Entry
H5J24_02225 CDS
T08205
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao01501
beta-Lactam resistance
ccao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H5J24_02225
01503 Cationic antimicrobial peptide (CAMP) resistance
H5J24_02225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccao03036
]
H5J24_02225
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccao02000
]
H5J24_02225
01504 Antimicrobial resistance genes [BR:
ccao01504
]
H5J24_02225
Chromosome and associated proteins [BR:
ccao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H5J24_02225
Transporters [BR:
ccao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H5J24_02225
Antimicrobial resistance genes [BR:
ccao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H5J24_02225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
Biotin_lipoyl
HlyD_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
UHO39006
LinkDB
All DBs
Position
complement(498911..500071)
Genome browser
AA seq
386 aa
AA seq
DB search
MNIPGKTRFIVLISSIILLQSCTKAAEGSNTAPPAPELPVYTVISSPATTYQEFPTALEG
KNNVEIRSQVDGYLDRIYVEEGAYVRAGQPLFKIDSRSYGEQMNMAQANLQVANANIQKA
KVEVDRLQPLVAAKVVSDVQLKTAKANYEAAVAASAQARASVGSAKINVGFTTITAPVSG
YIGRIPFKKGSLISRTDPNPLTLLSDISEIYAYFSLSELDFIAFQNKYPGATLDEKLKNM
PMVDLIIADNSTYPGKGRLSIVDGQFDKTTGAISVRAVFPNANGSLRTGNTGRVRMPQLI
SNAVVIPQESTFEIQDKTYVYVVGKDQKVTGKPIKISGKTDSYYFISEGLAPGEKIVYTG
IGSLKDGVSIKPKAISSDSLLRAKPL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacctggaaaaacaaggtttattgtacttatttcaagtataattcttttacag
agctgcacaaaggctgcggaaggatccaatactgcacctccagctcctgaacttccggtt
tataccgttatatcctctcctgctaccacttatcaggaattcccaactgctttggaaggg
aaaaataatgtggaaataagatctcaggttgatggatatcttgacagaatttatgtagag
gaaggcgcttatgtaagagcgggacagcctttatttaaaatagattctagaagctatggt
gagcaaatgaatatggctcaggccaatcttcaggtggctaatgccaatatacagaaggct
aaagtagaagttgacagacttcagcctttagtggcagcaaaagtagtttctgatgtacag
cttaaaacggcaaaagccaactatgaggcggctgtagcagcatctgcacaagccagagca
tctgtgggaagcgccaaaatcaatgtaggatttaccaccattacagcaccggtaagtgga
tatattggaagaattcctttcaaaaaaggaagtttaatctccagaacagatcctaatcca
ttgactttattatcagacatcagtgaaatttatgcttatttctctttaagcgagcttgat
tttattgcatttcagaataaatatccgggggcgactttagatgaaaagctaaaaaatatg
ccaatggtagatttgattattgctgacaacagtacttacccaggaaaaggaagattaagt
attgtagacggacagtttgacaaaacaacaggagccatcagtgtacgtgcagttttccct
aatgcgaacggatcgttgagaaccggaaatacaggtagagtacgtatgccacaactgatt
tcaaatgcagtggtaattccacaagaatctactttcgaaattcaggataagacctatgtc
tatgtagtcgggaaagatcaaaaggtaacaggaaagcctattaaaatctcaggaaagacg
gatagttattactttatttctgaaggacttgcgccgggagaaaagattgtctacactgga
atcggaagcctgaaagacggagtatccataaaacctaaggctatttcttcagacagttta
ttgagagcaaaacctttgtaa
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integrated database retrieval system
