Chryseobacterium capnotolerans: H5J24_05500
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Entry
H5J24_05500 CDS
T08205
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ccao
Chryseobacterium capnotolerans
Pathway
ccao01501
beta-Lactam resistance
ccao01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H5J24_05500
01503 Cationic antimicrobial peptide (CAMP) resistance
H5J24_05500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccao03036
]
H5J24_05500
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccao02000
]
H5J24_05500
01504 Antimicrobial resistance genes [BR:
ccao01504
]
H5J24_05500
Chromosome and associated proteins [BR:
ccao03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
H5J24_05500
Transporters [BR:
ccao02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H5J24_05500
Antimicrobial resistance genes [BR:
ccao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
H5J24_05500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
YknX_C
HH_MFP_RND
BSH_CusB
RND-MFP_C
HH_CzcB
HH_EMRA
BSH_YknX
Biotin_lipoyl
BSH_CzcB
CzcB_C
Beta-barrel_RND_2
HH_AprE
ATP-synt_DE
LPAM_1
T5_Terminase_small
RzoQ
Motif
Other DBs
NCBI-ProteinID:
UHO39547
LinkDB
All DBs
Position
1218852..1219997
Genome browser
AA seq
381 aa
AA seq
DB search
MQRFFVQKSTLLFLSLIALTGCKKSDQNQAYQQQAPELPVEIVKQGDASVSREYAASVEG
ISNVEIRPQVTGYLSKIFVDEGDYVRAGQPLFKIEDRIFAEQLKSAQAAFITAQANLSTS
KIDLDRKKELFKNKMVSEIQVKEAEAAYNAARGAVSQSTSSIESAKINLNFSTIKAPVSG
FIGRFNYRLGSLMTPGNQEPITLLSDIHEVYTYFSLSENDFNNFQKQYVGNSIDEIIKNT
PAVSLLLSGGEKYTETGRIDAVEGQFNKTTGSITLRAKFNNPNNTLRSGNTGKILLDQFY
SNVVLLPIASTRTIQDKVFVFTIKNGKAEMLPVEVNGKAGDHFIVSKGLKAGDQYIVSGF
DRLQPGTPVVAQKKNAQQKKS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagattttttgttcaaaaatcaaccctactttttctttcgctcatcgctttgacg
ggatgtaagaagagtgatcaaaaccaggcttaccaacagcaggcgccagaacttcctgta
gaaatagtaaaacagggagacgcttctgtttcaagagaatatgcagcatccgttgaggga
atttctaatgtagaaatcagacctcaggtaaccggatatttaagcaaaatttttgttgat
gaaggagattatgtgagagccggccagcctttgtttaaaatcgaagacagaatatttgct
gagcagctaaaaagtgcacaggcagcattcattacagcgcaggctaatctttccacttca
aaaattgacttggacagaaagaaggaactattcaaaaataaaatggtgtccgaaattcag
gtgaaagaagcagaggcggcttataatgctgcaagaggagccgtaagccaatcaacatct
tccattgaatcagcgaagattaatcttaatttttctacgattaaagctccggtaagcgga
tttatcggaagattcaactatcgtttgggaagtttgatgaccccgggcaatcaggaaccg
attaccttattatcagatatccatgaggtatatacttatttcagcttaagtgaaaatgac
tttaataatttccagaagcaatatgtgggaaacagtattgatgagattattaaaaataca
ccagcagtatctctattgctttccggtggtgaaaaatatactgaaacgggaagaattgat
gctgttgaaggacagttcaacaaaacgactggctctattaccttaagagcaaaattcaac
aacccgaataatactttaagaagtggaaatacaggaaagatcctattggatcagttctat
agcaatgttgtgctgcttccgattgcatctaccagaaccattcaggataaagtttttgtg
tttaccatcaaaaatggaaaagcagaaatgcttcctgtagaagtgaatggaaaagcgggt
gatcatttcatagtttccaaaggcttgaaggctggagatcagtatatcgtttccggtttc
gacagattacagccggggactcctgtagtggcacaaaagaaaaatgctcaacagaaaaaa
tcgtaa
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