Cyprinus carpio (common carp): 109085393
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Entry
109085393 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: DEP domain-containing protein 1A
KO
K11158
retinoid isomerohydrolase / lutein isomerase [EC:
3.1.1.64
5.3.3.22
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar00830
Retinol metabolism
ccar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00830 Retinol metabolism
109085393
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.64 retinoid isomerohydrolase
109085393
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.22 lutein isomerase
109085393
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Motif
Pfam:
RPE65
DEP
WHD_Fungal_DR
Motif
Other DBs
NCBI-GeneID:
109085393
NCBI-ProteinID:
XP_042617867
Ensembl:
ENSCCRG00000004212
ENSCCRG00000034832
UniProt:
A0A9Q9YCU5
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Position
A8:complement(8439976..8455392)
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AA seq
1270 aa
AA seq
DB search
MSSHIVTPGPYRATKLWNEVTKLFRAGMPLKKHRQHFRVYMNCFTASAAVDWLHELLNNN
SNFGPKVTRHQTIQLLKKFLKNHVIEDVKGRWGMEDLEDNSTLYRFPSTSPLKPIPNRSP
FLRKKSMSMMDRESFFKFRSSKIFDKEILENVDPKTQESPMGSSSEETEHCRELTEDDIQ
VIWKNVTLTHLQKLVGSGALEDVLDPAQVNPQFIVYNMTQVNKHGVVSLEDKTDDLPHWV
LSAMKCLANWPKYDSNQPSYPGFERDVFKTVSEYFYGLSQPLLTYQFYELFVNILVMCGY
ITAPKTQRGKRKNLKEPNCPQSQNPYVNAANLFKSTECLLLSLIRKEAFDEVDLPMREVF
SSKAETKLETHRAQQTVFKGRWASDGDRLGGSYLEISQAHKKTEVPYGRLWSRSCSLEGI
VDNRLKNRLLRSSESLQSCSSDKSSSQTDSPLDPNLKFELQGSSVSINSCVQTSSNNTSS
QLPSDLRRTNQRSSRARPRSIGNLFDIKENRETSASSFSIHTPVAEITMRPDSTSSIGLR
GPGLLSLHGSCMNIRAGPSFSRRCQSSLDLSKPAPTRPPSAPLARHPKQSLLQPSLERVA
IEALQLCTLLLPPASRRKLQLLLRMISRMSQNVDMPRLHDVIGTRTLLVQTFSRCVLRCE
EVDDLDELLATRLLSFLMDHHQEVLEVPVYLRNAVEDHISYLKSLSWRRSSKTLWLFLGT
ERFWFTHTGIISPQTRFNMVSCLEHPAGGYKKIFESCEELAEPIPAHVSGKIPAWLTGSL
LRMGPGLFEIGDEPFYHLFDGQALIHKFDLKDGHVTYFRRFIRTDAYVRAMTEKRIVITE
FGTAAYPDPCKNIFSRFFTYFQGIEVTDNCLVNIYPIGEDFYACTETNYITKVDPDTLET
IKKVDLCNYLSVNGVTAHPHTEPDGTVYNIGNCFGKNMSLAYNIVKIPPPQEDKSDPIEK
SKVLVQFPSSERFKPSYIHSFGMTENYFVFVETPVKINLLKFLTSWSIRGTNYMDCFESN
DKMGTWFHLATKNPGEYMDHKFRTSAFNLFHHINCYEDQGFIVVDLCTWKGHDFVYNYLY
LANVRQNWEEVKKAALRAPQPEVRRYVLPLDIHREEQGKNLVSLPYTTATAVMCSDGTVW
LEPEVLFSGPRQAFEFPQINYKKYCGKNYTFAYGLGLNHFVPDRICKLNVKSKETWIWQE
PDAYPSEPLFVQSPDAKDEDDGVLLSIVVKPGVTQRPAFLLILNATDLTEIARAEVDVMI
PVTLHGLYKP
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcacatcgtcaccccaggtccatatagggccaccaaactgtggaatgaagta
accaagcttttccgggctgggatgcctttgaagaagcaccggcagcacttcagagtttac
atgaactgcttcactgcatcagcagctgtggactggttacatgaactcttgaataacaac
agcaattttggacccaaggtcaccagacatcagacaatccagctgctgaaaaagttcttg
aagaaccatgttattgaagatgtgaagggtagatggggcatggaagacctggaggacaac
agtacgctgtacaggttcccatcaacatctccactgaagcccattcctaaccgttcccct
tttttgaggaaaaaaagcatgtctatgatggacagggagagtttcttcaaattcaggagc
tctaagatatttgacaaagaaatattggaaaatgtggatccgaaaacacaagaatctcca
atgggatcatcctcagaggagacggagcactgcagggagctcacagaggacgacattcaa
gtcatctggaagaatgtcacacttacacatttgcagaagttggtgggatcaggggctctt
gaagatgttttggatccagcccaagtcaatcctcagtttattgtgtataatatgacccaa
gtcaataaacatggagtcgtttcattggaagataagacagatgatttgccgcactgggtt
ttgtctgctatgaaatgtcttgcaaactggccaaagtatgactcaaaccagccatcttac
ccaggctttgagcgggatgtgtttaaaacggtctcagaatatttctacggtctttctcag
ccactgcttacttatcagttctatgaactctttgtgaacatcctggttatgtgtggctac
atcacggctcctaaaactcaacgtggaaagcgtaaaaacctgaaggaacccaactgccca
cagagccaaaacccctatgtgaacgctgccaacctgttcaaatcgaccgaatgcctcctg
ctgagcttaataagaaaagaggccttcgatgaagtggatttgcccatgagggaagttttc
agttcaaaagcagagactaagttagaaacccatagagcacagcagaccgttttcaagggt
agatgggccagcgatggagaccggctgggcggtagctatctagaaatatctcaggctcac
aaaaaaacagaagtcccgtatggcaggctttggtcaagaagttgctctttggagggaatt
gttgataaccgtttaaagaacagacttctcagatcatctgaaagcctacagtcctgcagc
agtgataaatcatcctctcaaacagattctccactagacccaaacctcaaatttgagctt
caaggttcctcagtgtccataaactcttgtgttcaaacttctagcaacaacacaagttcc
caactgccttctgatcttcgccgaaccaaccagagatcctccagggcccggcctagaagc
atcggtaacttgtttgacataaaggagaacagagaaacgtctgctagcagctttagcatc
cacactcctgtggctgaaattaccatgagaccagattccacatccagcattggccttaga
ggtcctggtttgctcagtttgcatggaagttgcatgaacattagggcaggtccgagcttt
agcagacgctgtcagagctctctggacctgagcaaacctgcacccactcggcccccttcg
gccccattagcacgccaccctaagcaaagtttattgcagccgtcactggagcgggtggcc
atcgaggccctgcagctctgcacattactcctgccccccgccagccgtcgcaaactacag
ctacttctgcgaatgatctcgcgcatgagccagaacgtggacatgccgcggctgcatgat
gtcattggaacacggactttgttggtgcagacgttctctaggtgtgtgctgcgctgtgag
gaggtggatgatctggatgagctcttggctacaaggctgttatcgtttcttatggatcac
catcaggaggttctggaggtgcctgtgtacctgcgtaatgctgtggaagatcacatcagt
tatctcaaatcactgagttggaggaggagttctaagactctgtggctgtttctgggaaca
gagcgtttctggtttacacacacaggcatcatctcacctcaaactcgtttcaacatggtc
agctgtcttgaacacccagccggtggctataaaaaaatctttgagtcatgtgaagagtta
gctgagcccattcctgctcacgtctcaggcaaaatcccagcctggctcactggcagcctg
ctccgtatgggccctgggctctttgagattggagatgaacctttttatcatctttttgat
ggtcaggctctcatacacaagtttgacctgaaagatggacatgtcacttatttccgcagg
tttatcagaaccgatgcttatgtgagagccatgacagagaaaaggattgtgatcacagag
tttggcaccgctgcatatccagatccatgcaaaaacatcttttccaggttttttacttac
tttcaaggcattgaggtgacggacaactgccttgtcaacatctaccccattggtgaggac
ttctatgcctgcacggaaaccaactacataaccaaagttgatcctgataccctagaaaca
ataaaaaaggtggacctctgcaattatctctcagtaaacggtgtgactgcacatccacat
actgaaccagacggtactgtatataacattggaaactgctttgggaagaacatgtcactg
gcctacaacattgtcaagatccctccaccacaagaagataaatctgatccaattgaaaag
tcaaaggttttggtgcagtttccaagcagtgagagattcaaaccatcctacatccatagc
tttggcatgacggagaactactttgtgtttgttgagactcctgtgaagatcaatctactg
aaatttctgacctcctggagtatcagagggacaaattatatggactgctttgagtccaat
gacaaaatgggtacatggtttcatctggcaaccaagaatcctggagaatacatggaccac
aaattcagaacatctgcctttaatcttttccatcacattaactgttatgaggaccaaggc
tttattgttgttgacctgtgcacttggaaggggcatgattttgtgtataattacctatat
ttggcaaatgtgaggcaaaactgggaggaagtcaaaaaagcagccttaagagctccacag
ccagaggtgcggagatacgtgcttccactggacatccacagggaagagcaggggaagaat
ttggtttcgcttccatacaccacagccacagctgtcatgtgcagtgatggaaccgtttgg
cttgaacctgaagttcttttctctggaccacgtcaagcttttgagtttcctcagatcaac
tacaaaaaatactgtgggaaaaattacacctttgcttatggacttgggctaaaccacttt
gttccagaccggatttgcaagttgaatgtgaaaagcaaagaaacttggatatggcaggag
ccagatgcctatccatccgaaccactgtttgtgcaaagccctgatgctaaagacgaagat
gatggtgttcttctgagtattgtagtgaaaccaggagtcacccagaggccagcgttcctc
ctcatactcaatgccactgacctgacagaaatagcacgtgcagaggttgatgtcatgatt
cctgtcactcttcatggcctgtacaaaccttag
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