Caretta caretta (Loggerhead turtle): 125633984
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Entry
125633984 CDS
T09292
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125633984
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125633984
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
125633984
Peptidases and inhibitors [BR:
ccay01002
]
Metallo peptidases
Family M10
125633984
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Metallopep
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
125633984
NCBI-ProteinID:
XP_048700034
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All DBs
Position
1:complement(30849294..30858292)
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AA seq
467 aa
AA seq
DB search
MKTLLLLLLLYVASSSAFPLAPETKDEDKNVQFVETYLRNFYKLETDKESLFKNKNIDPV
TEKLKEMQAFFGLKVTGKPDVDTLAVMKKPRCGVPDIGQYVLTDGNPKWERKNLTYRIVN
YTPDMNPADVDKAIQKAFKLWSNVSPLTFKRIYDGNADIMMSFETGDHRDNSPFDGPNGL
LAHAFQPGNGIGGDVHFDEEENWTKGSNGYNLFFVAAHELGHSLGLSHSTDPGALMYPTY
SYIEPKEFHLPQDDINGIQKVYGQSDNPVQPTGPTTPVTCDRKLTFDAVATMRGELLFFK
GRYFWHKHPQMTEVDLNFISLFWPNLPSGIQAAYENVERDQVFLFKENKYWVLSGYDLVY
NHPKSIYDFGFPKNVKRINAAFSDENTGKTYFFVSDKYWRYDENSQSMDQGYPKKIINDF
RGISKKIDAAFQHGRYIYFFQGTRQFQFDPNIKRVVSVMKSNSWFNC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccttctgcttctgctgttattatatgtagcatcctcctctgcttttcctttg
gctccagagacaaaagatgaagacaaaaacgtccagtttgtggagacttatctacgaaat
ttctacaagcttgaaacagacaaggagtctctctttaagaataaaaacattgaccctgta
actgaaaaactcaaggaaatgcaggcattctttgggctgaaggtgactgggaaaccagat
gttgacactttggcggtgatgaagaagcccaggtgtggtgtacctgatattggtcagtat
gtcctcactgatgggaatccaaaatgggaaagaaagaatctgacgtacaggattgtgaac
tacacaccagatatgaatccagcagatgtggacaaagcaatccaaaaggcgtttaaactt
tggagcaacgtgtcaccactaacattcaaaaggatctatgatggcaatgcagatataatg
atgtcttttgaaactggagatcatcgtgacaattctccctttgatggacctaatggactc
ctggctcatgcctttcagcctggcaatggtataggtggagatgtccactttgatgaggag
gaaaattggacaaaaggctcaaatggatacaacttgttctttgtcgctgcccatgaactt
ggccattcactgggtctgtctcattctactgatcctggtgccctgatgtaccccacctat
tcctacattgagccgaaggaatttcatcttccccaggatgacattaacggcattcaaaag
gtctatggacagtcagataaccccgttcaaccaaccggacccacaacgccagtaacttgt
gaccgcaaattgacttttgatgccgtcgctaccatgcgtggagaactgctgttctttaag
ggcaggtatttctggcacaagcatcctcagatgacagaggtcgacctcaatttcatttct
ttattctggccaaatctgccatctggaattcaagctgcttatgaaaatgttgaaagggat
caagtttttctttttaaagagaacaagtattgggtcctcagtgggtatgacttagtgtat
aaccacccaaaaagcatctatgactttggcttcccaaaaaatgttaagagaattaatgca
gctttcagtgatgagaatacagggaaaacatacttctttgtaagtgacaagtactggaga
tacgatgaaaacagtcagtccatggatcagggttatccaaagaagataatcaatgacttc
cgaggaattagcaaaaaaattgatgctgctttccagcatggtagatatatctatttcttc
caaggaacaagacagttccagtttgatcctaacatcaagagagttgtcagtgtcatgaaa
agcaatagctggtttaattgctga
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