Cinclus cinclus (white-throated dipper): 134055056
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Entry
134055056 CDS
T10813
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04622
RIG-I-like receptor signaling pathway
ccic04623
Cytosolic DNA-sensing pathway
ccic05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134055056 (ADAR)
04623 Cytosolic DNA-sensing pathway
134055056 (ADAR)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
134055056 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134055056 (ADAR)
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
134055056 (ADAR)
Spliceosome [BR:
ccic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134055056 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
MarR
TFIIE_alpha
AlkZ-like
Motif
Other DBs
NCBI-GeneID:
134055056
NCBI-ProteinID:
XP_062367157
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All DBs
Position
31:74170..86433
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AA seq
1194 aa
AA seq
DB search
MRLRVGECGVSDSSSPGSSAAWFPRVSQECAMIRGTGRGRGLYLTQSRHNCPSTNRGLLN
HPHTPQETNRGTFLHQQFLTEQDTEVSVLQGQGSHKESCTGGRQGVTPAPADRCQPSSSW
AGGRRFSSQHPRVETLPPRYCPPQYHHQVNSRRDSDSVRLDFQRLSLAGQDYEQEILTVL
RQLGEGRTCTAIDLARKLKTQKKEVNRVLYKLLREGKLHKGGETRPLWRIASPSLGRERS
PTGHSASCTGPACESRGGEQNTLGSGDAEMAETKEKICNYLFSVVETTALNLAKNIGLSR
AKDVNAFLSALEKLGDVHKQNATPPRWSLTNRKRERMQMRLKASSVMQMADPTPPESGLP
SSFVPPCPPEVATALPAVMAPEEESVENGRQPLGQAGQGNIGDMEADASEDTKPEFSSLS
KYDNSENSKWTTDDIPDNLNAINKQPDKSECIMNSQSSPSYAAQFETAFPCSPVEKLMAC
QEKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHEPRFKFQAVINGRPFPPAEAGSKKLAKQ
EAAANAMKVLMSEVNGRHGGIKCEEPFSSDSLEPELSLQLEPEVSSAAAQLNLLPGKHPI
SILMEYGQKSGNIIEFQLLSQEGPPHDPRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVA
VKILSGESVPHVLPEQPVVKSHSDQSMHNIATPDESKVVKMKGVGELIKYLNVNPVSGLL
EYARSNGFAAEFKLIDQSGPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVL
IGESEKTERMEGMSVTELPVSGSTLHDQMAMLSHQCFNSLTARIQHSLLGRKILAAIIMR
KGNKGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFMRFLYSELMKYDPSNP
SSAEESIFEQAGGKKLKIKSSVTFHLYVSTAPCGDGALFDKSCSDQANEMGQPHHQPLFE
NPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNILGLQGALL
SHFLEPVYLRSVTLGYLYSRGHLTRAICCRMERDGSTLKEKLQAPYHINHPEVGRVSVYD
SARQTGKMKESSVNWCLADESEVEVLDGTKGKVDGLKLGVSRVSKRKMFTLFQQLCAKNN
RKDLLSLSVYSDAKEAATAYQAAKQCFFSTLEELGYGSWIRKPQEEENFSVLDA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgagactgagggtgggagagtgtggagtgagtgacagctcctctcctggctcatcagca
gcctggttcccacgtgtgtcccaggagtgcgctatgatcagaggcactgggcgaggcaga
ggcttgtatcttacccagtcaagacataactgccccagcactaaccgaggtcttcttaac
caccctcataccccacaagaaactaatcggggaacctttttacaccagcagttcctaaca
gagcaggacactgaagtctctgtgttgcagggacagggatcacacaaggagtcgtgcacc
ggaggcaggcaaggtgtgacaccggctcctgcagacagatgtcagcccagctccagctgg
gctggagggcgtaggttctctagccagcatccccgggttgagactttgcctcctcggtat
tgccctccacagtaccatcatcaggtgaactcaaggagagattctgactctgtgaggctg
gatttccaaagactgtctcttgctgggcaagactacgaacaagaaattctaactgttctc
aggcagcttggggaggggaggacttgcacagcaattgatctggcacgtaaacttaaaact
caaaagaaagaggtcaaccgtgttttgtataagctcttaagagaaggcaagttacacaaa
gggggagagacacggccactgtggagaattgccagccctagcttagggagagaaagaagc
cctactggccacagtgccagttgcacaggtccagcttgtgagagcagaggaggagagcag
aacacacttggctcgggagacgcagagatggctgagacaaaggagaaaatctgcaactac
ttgtttagtgtggtggaaacaacagcactcaatcttgccaaaaacattgggctttccaga
gccaaggatgttaacgcatttcttagtgctctggaaaagctgggagatgtccacaagcag
aatgcaactcctccacgatggtccctgacaaacaggaaacgtgagaggatgcagatgagg
ctgaaggccagctcagtaatgcagatggcagatcccacacctcctgagtcaggtcttccc
tcttcctttgtccctccgtgtcccccagaggtggctacagctttgccagcagtgatggca
ccggaagaagaaagtgtagaaaatggacggcagcctttggggcaagctggtcaaggcaat
atcggtgacatggaagcagatgcatctgaggacactaagcctgaattctccagtttgagt
aaatatgataactcagaaaacagcaagtggaccacagatgatatcccagataatctgaat
gctatcaacaagcagcctgataagtcagaatgcattatgaattctcagtcttcccccagt
tatgcagcccagttcgaaactgctttcccatgttctcctgtagagaaactgatggcttgt
caggaaaagaacccagtgagtggccttactgaatattcccagtacacataccagcactgt
gatttcatcatgctggagcagaatggcccctctcatgagccacggtttaagttccaggca
gtgattaatgggcgcccattcccaccagcagaggcagggagcaaaaaattggctaagcag
gaggcagcagctaatgcaatgaaggtcctgatgagtgaagtgaatggaaggcatggtgga
atcaaatgtgaagagccgttttcctctgacagcttggaaccggaattgtctttgcagctg
gagccagaggtatcatctgcagcagctcaactcaacctgcttcctgggaagcaccctatc
agcatattaatggagtatggtcaaaagtcagggaacataattgaattccagctgctctct
caggaaggcccacctcatgatcctaggttcagctactgtgtgaaaatgggtgaccaaatt
ttccccgctgtggtaggaaacagcaagaagggagcaaagcaaatggcagcagaagttgct
gtgaagatcctttctggagagtctgtaccccatgtcttgcctgaacagcctgttgtgaag
tcccacagtgaccagtccatgcacaatattgccactccagatgaatccaaggtggtgaaa
atgaagggtgttggggagctcatcaaataccttaacgtcaatcctgtcagtggcctgctg
gaatatgcccgttccaatgggtttgctgcagagttcaaactcattgaccagtcaggacct
ccccatgaccccaagtttgtgtatcaggcgaaggttggtggccgctggttcccagctgta
actgcgcacaacaaaaagcagggcaagcaggaggcagctgatgcagcactccgagtcctg
attggggaatcagagaagactgagcgcatggaagggatgagtgtcacggagctccctgtg
agtggcagcaccctgcacgatcagatggccatgctgagccaccagtgcttcaacagcctc
actgctcgcatccagcacagcctgctcgggcgcaagatcctggctgccatcatcatgcgg
aaaggaaataagggtttgggagtggtggtcagcatcggaacaggtaatcgctgtgtgaaa
ggagaagagctgagcttaaagggggagacagtaaatgactgtcatgcagaaatcatttct
cgaagaggctttatgagatttctttacagtgagctcatgaagtatgacccgtctaatcct
tcctctgcagaagagagcatttttgagcaagcgggaggaaagaaactcaaaataaaaagc
agtgttacctttcacctctacgtcagcacagcaccgtgtggagacggagcactctttgat
aagtcctgcagtgatcaggcaaacgagatgggacagccccaccaccagcctctctttgag
aaccccaagcagggcaagctgcggaccaaggtggagaatggggaaggtaccattcctgtg
gagtcaagtgacattgtgcccacatgggacgggatccagcatggggaacggttacgaacg
atgtcctgcagtgacaaaatcttacgctggaatatactcggcttgcaaggggcattgctg
tcacacttcctagagccagtttatctccgctctgttacactcggttacttgtacagtcgg
ggtcacttgacacgtgccatctgctgccgcatggagagggatgggagcacactgaaggaa
aagctccaggctccatatcacattaaccatcctgaggttgggcgagtcagcgtgtatgac
tctgcaaggcagacaggcaagatgaaggagtcatcagtgaattggtgtcttgctgatgaa
agtgaagttgaagtcttggatggcaccaaagggaaagtagatggtctgaaactgggggtg
tctcgtgtgtccaagaggaaaatgttcaccctgttccagcagctctgtgcaaagaacaac
cgcaaagacttgctgagcttgtccgtgtactcagatgccaaggaggcagccacagcatac
caggcagccaagcagtgcttctttagcacactggaagagctgggctatggcagctggatc
cgaaaaccccaggaggaagaaaatttctctgtccttgatgcgtaa
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