Coregonus clupeaformis (lake whitefish): 121542729
Help
Entry
121542729 CDS
T08357
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X2
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04622
RIG-I-like receptor signaling pathway
cclu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121542729 (adar)
04623 Cytosolic DNA-sensing pathway
121542729 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121542729 (adar)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
121542729 (adar)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121542729 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
121542729
NCBI-ProteinID:
XP_041708172
LinkDB
All DBs
Position
Unknown
AA seq
1353 aa
AA seq
DB search
MSRGRGGPPIEHYHRPPLPQLQAKQQYYRAGPLGFHPRAPPQQAPHPNVHSYIGPVPPLV
PPSAHSQPLYPSAPPPPGHNPALSQQSSCPSGPNSFRQQQVHFLRGQNTEAPQFRVSPRG
AQSLGRGGPNGLYNGSNQSQAGYSIYSQNSSRGRGGYSSERGRGNGRDFGYPPSQGPPRG
PTSPRFWNQKQTLTQKQGFNRQWSLHADCADGLSFSEGFQSLSLDRERSYRGRVDRGDSF
DKASVGSSNNSNNKSAPTVQLPDIREQVLQALADLSPGETLQAKCLAKTLRLPKKFINQA
LYALERDKKASKHGESPPEWTVYIEPQEEPESRDSDPENPRSQQREHSVEVSQEGPSEDC
SLFLSVKEEDVVIEAEIQQTETQTPEGDKEEDYYVESDSHSSSSEPSESYRQHSQSQTQQ
PSINSSSNEELDLDFDERDMADCGSNQKELILQYLLEAGEVTALVISKNLGLRGAKQVNP
TLYAMEKQGDVSRNAEVTPHTWELSVHRRERMERSLKAERSTPAKVEGMGSGFQAVPPGL
EGLGANDEAEDESNGGQWATDDIPEFLNAISRDGGGTVAVSLAAPPPQNLRAKLQEVRAK
NPVSGLMEFAQYQGHNCEFLLLDQSGPSHDPRFRMQVMLDGRLFPVAEASNKKVAKKDAA
SATLRILLREIEGGGAEEGLTAGVDQAMDPTSDIPEVVEGPPQALSRSLPGGKNPVSMLM
EYSQRTGNPIEFINTGQEGPPHDPRFMFRVKIGESLCAEASAPSKKAARQLAAEEAVKEL
MADGRLQLNKPQFPLCLSGDEGGFMPACPSLPPLTEEELRSAHEAGVGDLISHLNNNAVS
GLLEYARARGFAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAAL
RVLIGEAEKAARTGELTPAELPLSGGTIHDQIAMLSHQRFNALTTRIQHSLLGRKILATI
VMKRGEGLGTVVSLGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFIRFLYAELLKHCEG
SEDSIFEPAEENKLRVKPDTTFHLYISTAPCGDGALFDKSCSEDAGDGQGHQPLFENAKQ
GKLRTKVENGEGTIPVESSTIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFL
HPIYLASITLGYLYSHGHLTRAVCCRLARDGEAFSKSLPAPYTLNHPEVGRVSVYDSTRH
TGKTKESSVNWSHPDHITVEVLDGTKGKLDGPKLDVSRVSKSNIFRQFRSLCQQCGRQDL
LALPSYAQAKMAAVSFQVAKQQFFEALGSHGYGAWIGKPLEEKSFDEAAAFDGQGAGSVA
NSNQGYNNNNSYGSTTTDYNSSQWGSSAYTQAM
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggacgaggagggccccccatagagcattaccaccgaccccctctcccccaa
ctgcaggctaagcaacaatactacagagctggacccctgggatttcaccccagagccccc
ccgcaacaggccccacacccaaacgtccattcatacataggcccagtcccccctctagta
ccacccagtgcccactctcagccgctctacccctccgcccctcccccacccggccacaac
ccagccctgagtcagcagagctcttgtcccagtggtcctaactccttcaggcagcagcag
gtccacttcctgaggggacagaacactgaggcgccccagtttagggtgagccccagaggg
gcacagagcttgggtcgagggggaccgaacggactctataacggatcgaaccagtcccag
gcagggtacagcatatactcccaaaacagctccagggggagagggggatacagcagcgag
cgaggcagagggaacggtagggacttcgggtacccacccagtcagggaccccctagagga
ccaaccagccctagattctggaaccagaagcagactttgacccaaaagcaaggcttcaac
agacagtggagcctgcatgcagactgtgctgacgggctgtctttctcagaaggctttcag
agtttatccttagacagagagaggtcctacagaggaagagttgacagaggcgacagcttt
gacaaagcttctgtcggtagtagtaataattcaaacaacaagagtgcccctacagttcaa
ctacccgacatccgagagcaagttttgcaagccttggcagatttgagccccggcgagaca
ctacaagcaaagtgtttggcgaaaacgctgcggctgcccaaaaagtttatcaaccaggcc
ctttacgctctcgagcgtgataagaaagcttcgaaacacggtgaaagtcctccagagtgg
actgtctacatagaaccacaggaagaaccggaaagtagagattctgatccggaaaaccca
cgttcacaacagagggaacattctgtggaggtgtcacaggaagggccttcagaagattgt
tctctcttcctatctgtgaaggaggaggacgttgtcatcgaggctgagatccagcaaact
gaaacgcagacccctgagggcgacaaagaagaagattactacgtagaatccgattcgcac
tcctcttcctcagaaccatccgagtcatatcggcaacattcccagtcccaaacccaacaa
cccagtatcaacagcagcagtaacgaagagcttgacctagactttgacgagagagacatg
gcggactgcggcagtaaccagaaggagttgatcctgcagtatctgctggaggcaggggag
gtcacggccctggtgatctccaagaacttgggcttgaggggtgccaagcaggtcaacccc
accctgtacgccatggagaagcagggcgatgtgagccgcaacgcagaggtgacccctcac
acctgggagctgtctgtccaccgcagggagaggatggagaggagcctcaaggccgagcgc
agcacccctgccaaggtcgagggaatggggtctggattccaggcggtgccacccggattg
gagggtctaggggccaacgatgaggcggaggacgagtcgaacggagggcagtgggcgacc
gacgatatcccagaattcctcaacgccatcagccgggacggaggggggacagtggcagtc
tccctggcagcgcccccacctcagaacctccgtgccaaactccaggaggtgagggccaag
aacccagtcagcggcctgatggagttcgcccagtaccagggacacaattgcgagttcctg
ctcctcgaccaatcagggccttcacatgaccccagattccgtatgcaggtcatgctggac
ggaaggttgtttcctgttgctgaggcatctaataaaaaggtggcgaagaaagatgccgcc
tcagcgaccctgaggattctgcttcgcgagatagaggggggaggggctgaggaggggctc
actgcaggggtggaccaggccatggaccccacatctgacatccctgaggtagtggagggt
ccgccccaggccctgtcccgttccctgccggggggtaagaacccagtgtccatgctgatg
gagtacagtcagcgcactggaaacccgatcgagttcatcaacactggacaggagggccca
cctcacgacccacggttcatgttcagggtgaaaataggggaaagcctgtgtgctgaggcc
tcagcccccagtaagaaggctgccaggcagctggccgcagaggaggccgtcaaggagtta
atggccgacgggagactgcagctcaacaagccccagttccccctgtgtctgtctggtgat
gaggggggcttcatgcccgcttgcccctccctgccccctctgacagaggaggagctgcgt
tctgcccacgaggcgggggttggtgacctcatcagccacctgaacaacaacgccgtgtca
ggcctgctggagtacgcccgggccaggggctttgctgcagagatacggctggtcgggcag
tcaggaccaccgcacgagcccaagtttacctaccaggctaagctagggggtcgctggttc
cctcctgtctgtgcgtccaataagaagcaagggaaacaggaagcagctgacgcagctctg
agggtcctgattggagaggctgagaaggccgcccgcaccggggaactaacccctgcagag
ctgccactgagtggtgggaccatccatgaccagatcgcaatgttgagtcaccagcgcttc
aacgccctcaccacacgcatacagcacagtcttctgggaaggaagatcctcgccaccatc
gtcatgaagaggggggaagggctggggaccgtggtcagcctgggaacaggaaatcgttgc
gttaaaggggaggagctgagtcttaaaggggacaccgttaatgactgccacgcagaaatc
atctccaggagaggatttatcaggtttctgtatgctgagttgctgaagcactgtgaagga
tcagaggacagtatatttgagccagctgaggagaacaagctccgggtgaaacctgacacc
accttccacctctatatcagtactgctccgtgcggagacggggcgttgtttgataagtcg
tgcagcgaggacgcaggggacggccaaggccaccagcccctgtttgagaacgccaagcag
ggcaagctgcgcaccaaggtggagaatggtgaaggcaccatcccggtagagtcatcgacc
atcgtgcccacctgggacggcatccagcacggcgagcgtctgaggaccatgagctgcagc
gacaagatccttcgctggaatgtcctggggctgcagggagccctgctctcccactttctc
catcctatctacctggcttcaatcaccctgggctacttgtacagccatggccacctgaca
cgtgctgtctgctgccgattggccagagacggcgaagccttctccaagagtctacctgct
ccctacacactcaaccacccagaggtgggcagggtgagtgtgtatgactcgacgcgtcac
acagggaagaccaaggagtccagcgtgaactggagccacccagaccacatcactgtggag
gttctggacgggaccaagggcaaactggacggccccaaactggacgtgtcgcgggtctcc
aagtccaacatcttccgtcaattccggtcgttatgccaacagtgcgggcgccaggatctg
ctggctctcccatcgtacgcccaagccaagatggccgccgtgtccttccaggtcgccaag
cagcagttcttcgaggccctgggtagccatggttatggagcctggattggcaagccattg
gaggagaagagttttgacgaagcggctgccttcgatggccaaggggcaggaagtgttgct
aatagcaaccaaggatacaacaacaacaatagctatggaagcacaaccactgactataac
agcagccagtggggtagtagtgcgtacacacaggccatgtag
DBGET
integrated database retrieval system
