Campylobacter coli 15-537360: N149_0966
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Entry
N149_0966 CDS
T02895
Symbol
cmeD
Name
(GenBank) multidrug efflux RND transporter outer membrane subunit CmeD
KO
K12340
outer membrane protein
Organism
ccq
Campylobacter coli 15-537360
Pathway
ccq01501
beta-Lactam resistance
ccq01503
Cationic antimicrobial peptide (CAMP) resistance
ccq02020
Two-component system
ccq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ccq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N149_0966 (cmeD)
09132 Signal transduction
02020 Two-component system
N149_0966 (cmeD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N149_0966 (cmeD)
01503 Cationic antimicrobial peptide (CAMP) resistance
N149_0966 (cmeD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccq02000
]
N149_0966 (cmeD)
02044 Secretion system [BR:
ccq02044
]
N149_0966 (cmeD)
01504 Antimicrobial resistance genes [BR:
ccq01504
]
N149_0966 (cmeD)
Transporters [BR:
ccq02000
]
Other transporters
Pores ion channels [TC:
1
]
N149_0966 (cmeD)
Secretion system [BR:
ccq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
N149_0966 (cmeD)
RTX toxin transporter
N149_0966 (cmeD)
Multiple protein transporter
N149_0966 (cmeD)
RaxAB-RaxC type I secretion system protein
N149_0966 (cmeD)
Antimicrobial resistance genes [BR:
ccq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
N149_0966 (cmeD)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
N149_0966 (cmeD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AGZ21406
LinkDB
All DBs
Position
complement(763673..764947)
Genome browser
AA seq
424 aa
AA seq
DB search
MLEKYLKSAIFLALYPLVMLASNLHEFIALSQNNESYLIKQMQSEQANLDKEQAFRNYLP
SLSLNSAYVANNKDRFIIDPQESLFAKVSLNFLLFDGGAREANLRALESKEKLSLLDKEQ
SKNYLALNAITLYFNTLSLKKILLANQQKVAFLKSTFERLQKFYDAGLSPKDELESIKAK
YHLSLLELSQNELKLANIQKEIKILSDTDFKVQGNAFLENPQQEKSQNYEVMIAKEQINL
AKESVNLAKAEYFPKFYIQDNFNFYKNNYNPKVPAPFVNLADQFLEKYSQGNQFILGMEW
KIFDFNARAKEVEKERLNVQIANANARFSERKNKEELNYLDKSLKVLQEQILALNLSLNA
ANLAFESVDKKYQAGLVSYVEYLQALEAKFKAQSDLELAKNEFEITKANYYFNAGIDLNS
KVKE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaaaatatttaaaatcagctatatttttagctctttatcccttagtaatgcta
gcttctaatttgcacgaatttatagcactaagtcaaaataatgaatcctatctcattaag
caaatgcaaagcgaacaagcaaatttagacaaagaacaagcttttagaaattacctaccc
tctcttagtctaaactcagcttatgtagccaacaataaagatcgcttcattatcgatcca
caagaaagtttatttgctaaagtttctcttaattttttactttttgatgggggtgctaga
gaggctaatttaagagctttagaaagcaaagaaaaattaagccttttagacaaagaacaa
agcaaaaattaccttgccttaaatgcaatcacactttattttaacaccctaagtcttaaa
aaaattttactagcaaatcaacaaaaagtagcttttttaaaatcaacttttgaaagattg
caaaaattttacgacgcaggacttagccctaaagatgaacttgaaagtattaaagctaaa
taccatttaagcttattagagctcagtcaaaatgaattaaaacttgccaatatacaaaaa
gagattaaaattttaagtgatacagattttaaagtgcaagggaatgcttttttagaaaat
ccgcaacaagaaaaaagtcaaaactatgaagtaatgatagctaaagaacaaatcaatctt
gctaaagaaagtgtaaatttagcaaaagctgaatattttccaaaattttatattcaagat
aattttaacttttataaaaacaattataatccaaaagttccagctccttttgtaaactta
gcagatcaattcttagaaaaatattctcaaggtaatcagtttattttaggtatggaatgg
aaaatttttgatttcaatgcaagggctaaagaagttgaaaaagagcgtttaaacgttcaa
atagccaatgcaaacgcaagatttagtgagagaaaaaataaagaagaattaaattattta
gacaaaagtttaaaagttttacaagaacaaattttagctcttaatcttagcttaaatgct
gcaaatttggcttttgaaagtgtagataaaaaataccaagcaggacttgtttcttatgtg
gaatatcttcaagctttagaggctaaatttaaagcacaaagcgatttagagcttgctaaa
aatgaatttgaaattactaaagcaaattattattttaatgcgggtatagatcttaattca
aaggttaaagaatga
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