Caulobacter vibrioides NA1000: CCNA_01379
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Entry
CCNA_01379 CDS
T00841
Symbol
rsaFb
Name
(RefSeq) type I secretion outer membrane protein rsaFb
KO
K12340
outer membrane protein
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs01501
beta-Lactam resistance
ccs01503
Cationic antimicrobial peptide (CAMP) resistance
ccs02020
Two-component system
ccs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CCNA_01379 (rsaFb)
09132 Signal transduction
02020 Two-component system
CCNA_01379 (rsaFb)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCNA_01379 (rsaFb)
01503 Cationic antimicrobial peptide (CAMP) resistance
CCNA_01379 (rsaFb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccs02000
]
CCNA_01379 (rsaFb)
02044 Secretion system [BR:
ccs02044
]
CCNA_01379 (rsaFb)
01504 Antimicrobial resistance genes [BR:
ccs01504
]
CCNA_01379 (rsaFb)
Transporters [BR:
ccs02000
]
Other transporters
Pores ion channels [TC:
1
]
CCNA_01379 (rsaFb)
Secretion system [BR:
ccs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CCNA_01379 (rsaFb)
RTX toxin transporter
CCNA_01379 (rsaFb)
Multiple protein transporter
CCNA_01379 (rsaFb)
RaxAB-RaxC type I secretion system protein
CCNA_01379 (rsaFb)
Antimicrobial resistance genes [BR:
ccs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CCNA_01379 (rsaFb)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CCNA_01379 (rsaFb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7780
GvpG
Motif
Other DBs
NCBI-GeneID:
7331837
NCBI-ProteinID:
YP_002516752
UniProt:
A0A0H3C7S5
LinkDB
All DBs
Position
1493232..1494683
Genome browser
AA seq
483 aa
AA seq
DB search
MLMSNRRRAGLLAAACSAGLLAGSFSIANAETLADAIALAYQTNPTLQQQRASARITDEG
VVQAKTGFRPTVGATADITGANTNPASAGADVKLSGSSAALSIIQPLYTGGRASAGVSAA
EADVLSAREGLRAVEQGVLVSVVQAYVDVRRDQERLRIAKENVAVLQRQLEESNARFDVG
EITRTDVAQSQARLASAKASLSGAQAQLEVSRASYAAVVGQTPGELAPEPSLAGLLPASV
DQAFEAAQTNNPGVTSAKFNEEAAAARVAVAKAGYRPTVSARASLGYDATRRSGVGSQFD
DYSRTVSGAITASIPLFAGGLTTSQVRAANERESAARSAVEGAKRTAIQQVSNAWSNLLA
SRAGLVANEEQVRATRIAFEGVRQEQQVGLRTTLDVLNAQLELSNAELALVSARRDEYLA
SAVVLQAMGQLEVTKLASNTAAYDPKTSYNRVTRGVGWVPWEPVVQAIDSVGAASTKPPS
GSK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgtcgaaccgtcgacgggccgggttgctggccgccgcttgcagcgctggtctt
ctggccgggtccttctccatcgcgaacgccgagactctcgccgatgcgatcgcgctcgcc
tatcagaccaatccgacgctgcagcaacagcgcgccagcgcccgcatcaccgacgaaggc
gtggtgcaagccaagaccggcttccgcccgaccgtgggcgccaccgccgatatcacgggg
gcgaacaccaatccggccagcgccggcgcggatgtgaagctctctggcagcagcgcggcg
ctttcgatcatccagccgctctacaccggcggtcgcgccagcgcgggcgtcagcgccgct
gaagccgacgtgctgtctgcgcgggaaggtcttcgcgcggtcgagcagggggtgctggtc
agcgtcgtccaggcctatgtcgacgtgcgccgagaccaggaacgcctgcgcatcgccaag
gaaaacgtcgcggttctgcagcgccagctcgaagaatcgaacgctcgcttcgacgtgggt
gagatcacccggacggacgtcgcccagtctcaggcgcgcttggcttcggccaaggccagc
ctgtcgggcgcccaggcccagttggaagtcagccgcgcctcctacgctgcggtggtcggt
caaacgcccggcgaactggctcccgagccgagcttggccggactgctgcccgccagcgtc
gaccaggctttcgaggccgcccagacgaacaatcctggcgtgacctcggcgaagttcaat
gaagaggcggccgccgcgcgtgtcgccgtcgccaaggcgggctatcgaccgacggtctcg
gcgcgcgcttcgctgggttacgatgcgacgcgtcgttctggcgtcggcagccagtttgac
gactattcgcgcaccgtttcgggcgcgatcacggcctcgatcccgcttttcgccggcggc
ttgaccacgtcgcaggtccgggcggccaatgaacgtgagagcgctgcgcgcagcgccgtc
gaaggcgccaagcgcaccgcgatccagcaagtctcgaacgcgtggagcaatctgctggcg
tcgcgcgccggtctggtcgccaacgaggagcaggttcgagcgacccgcatcgctttcgaa
ggcgtgcgtcaggagcaacaggtcggcctgcggacgacgctggacgttctgaacgcccag
ctggagctgtccaacgccgaactggcgctggtttcggcccgtcgcgacgaatacctggct
tccgccgtggtcttgcaggccatgggccaactggaggtgaccaagctcgcctccaacacc
gccgcctatgacccgaaaacctcctacaaccgcgtgacgcgcggcgtgggctgggtgccg
tgggagccggtggtgcaggcgatcgacagcgtcggcgcggcttccaccaagcccccgagc
ggctcgaaatag
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