Chryseobacterium cucumeris: JNG87_11010
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Entry
JNG87_11010 CDS
T10197
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ccuc Chryseobacterium cucumeris
Pathway
ccuc01501
beta-Lactam resistance
ccuc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JNG87_11010
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JNG87_11010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccuc02000
]
JNG87_11010
01504 Antimicrobial resistance genes [BR:
ccuc01504
]
JNG87_11010
Transporters [BR:
ccuc02000
]
Other transporters
Pores ion channels [TC:
1
]
JNG87_11010
Antimicrobial resistance genes [BR:
ccuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JNG87_11010
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JNG87_11010
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JNG87_11010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TMEM151
Vps54_N
Motif
Other DBs
NCBI-ProteinID:
QRA41171
LinkDB
All DBs
Position
2429831..2431231
Genome browser
AA seq
466 aa
AA seq
DB search
MYKKLILVSILAGSLSSCIGYKEATKENIDQLKEKSEIATHLQIPDDWIFDRKADSKSIS
YDWINDLKTSQLEALVKEGMLYNADLIIAREKLNQIELAMEIAGSDLYPSVSAVANTSNN
LVSGSQVQRLALKANWEIDLWGKNKSSQMAGTSSYFSAKHQNTLLHQSIAGMIAKAYFLN
IAGNIQENKIESYIQKTKDLEKLYIIQKKVGTANAIDVSNISAEIISLQGYLEKIKNANM
QSRRSLELLTGKYPEGKLATQNFFNSVKSSIPESFPLELLENRSDIQASHFQIEKAFYEV
QEAKAARLPSLSISSSLGSAGSNVESINSLFSNPLIKVGGGLVSPLFNGGKLKKNVEVKN
SQQKQVVEEYSKAVLNALNEVESSLANLRSIERQMAYTTNAVNEVKNNISLTEKQIKVGT
SNSFVLIRKQRDLLKNEMNLINLELQYRIERINLYMALGAENFIYS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaagttaattttagtgagcatacttgctggatctttaagctcctgcatcggt
tataaagaagctacgaaggaaaatatagatcagcttaaagaaaagagtgaaattgctact
catctacaaattccggatgactggatttttgacagaaaagcagattcaaaatcaatttcc
tacgactggatcaatgatcttaaaacctcacagctggaagccctggttaaagaaggaatg
ttatacaatgcagatcttattattgccagagaaaagcttaaccagattgagctggcaatg
gaaattgccggaagcgacctttatccgagcgtaagtgctgtagccaacacttcgaataat
ctggtcagtggcagccaggttcagcgccttgcgttaaaagccaattgggaaattgacctt
tggggtaaaaataaatcttcacagatggccggcaccagcagttatttttctgcaaaacat
cagaatacactgctgcatcagtctattgcaggaatgattgccaaagcttattttctgaat
attgcaggaaacattcaggaaaataagattgaaagctatattcagaagaccaaagacctg
gaaaagctctacatcattcaaaagaaagttggaacggcaaatgctattgatgtgtccaat
atttctgctgaaattatttccctgcagggttatcttgaaaagattaaaaatgccaatatg
cagtcgagaaggtctctggagcttcttaccggaaagtatccggagggaaaactggcaacc
cagaatttctttaattctgtaaaaagcagtattcctgaatcttttcctctggaacttctt
gaaaaccgatcagacatacaggcaagtcatttccagatcgaaaaggctttttatgaagta
caggaagctaaagcggcaagacttccttcattaagtatcagttcttcacttggtagtgcc
ggaagtaatgtggaatccattaattctttattttccaatccattaataaaagtgggagga
ggattagtttctcccctgttcaacggtggaaagcttaaaaagaatgtggaagtaaaaaat
tcccagcaaaaacaggttgttgaagaatattcaaaagctgttctgaatgcactgaacgaa
gtggaatcatctttagctaatctccgttctattgaaagacagatggcttatacaaccaac
gctgtcaatgaagtgaaaaacaatatttctctaactgagaaacaaataaaggtcggtacc
agcaacagttttgtactgatccgtaaacaaagggatcttttgaaaaatgaaatgaacctc
atcaatctggaacttcagtacagaatagagcgtattaatctttatatggctttaggtgcg
gagaactttatttattcataa
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