Campylobacter coli RM4661: YSS_01600
Help
Entry
YSS_01600 CDS
T03166
Name
(GenBank) outer membrane channel protein CmeC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ccy
Campylobacter coli RM4661
Pathway
ccy01501
beta-Lactam resistance
ccy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YSS_01600
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YSS_01600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccy02000
]
YSS_01600
01504 Antimicrobial resistance genes [BR:
ccy01504
]
YSS_01600
Transporters [BR:
ccy02000
]
Other transporters
Pores ion channels [TC:
1
]
YSS_01600
Antimicrobial resistance genes [BR:
ccy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
YSS_01600
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
YSS_01600
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
YSS_01600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHK76279
LinkDB
All DBs
Position
complement(309859..311337)
Genome browser
AA seq
492 aa
AA seq
DB search
MNKIISISAIASFTLLISACSLSPNLNIPEANYSIDNKLGALSWEKENNSSITKNWWKEF
DDEKLNHVVDLALQNNNDLKLAFIHMEQAAAQLGIDFSSLLPKFDGSASGSRAKTPTNAP
SNRTGGVSYGNDFKMGLDLSYEIDLWGRYRDTYRASRSGFKASQYDYEAARLSIVSSVVQ
TYFNFVNANENEKALKDAYESAQEVYQINYEKFQVGAVGEYEIAQSRANLESTALQYNEA
KLNKENYLKALKILTSNDLNDILYQDQAYQVFKLKDFDIPSGISSTILLQRPDIGSSLEK
LTQQNYLVGVARTAFLPNLSLTGLLGFESGDLNTLVEAGSRTWSIGGNFVMPIFHWGEIY
QNVNLAKLNKDEAFVNYQNTLVAAFGEIRYALIARKTIRLQYNNAQASELSYKRIYEISK
ERYDVGEMSLQDYLQARQDWLNATVAFNNTKYSYANSIVNVIKAFGGGFEQGENISKNIE
EESKTLDMSFRE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaataatttcaattagcgctatagcaagttttactcttttgatttcagcttgc
tctttaagtccaaatttaaatattcccgaagcaaactatagcattgataataagcttgga
gccttatcctgggaaaaagaaaacaatagctctatcacaaaaaattggtggaaagaattt
gatgatgagaaattaaatcacgtagttgatttagctcttcagaacaataatgatttaaaa
cttgcttttattcatatggaacaagctgctgctcaattaggtatagattttagcagtttg
ttgccaaaatttgatggtagcgcaagcggaagtcgtgcaaaaacacctacaaatgctcca
agcaaccgcactgggggagtaagctatggcaatgattttaaaatgggactggatttaagc
tatgaaatcgatctttggggaagataccgcgatacttatcgcgcttcaagatcaggcttt
aaagccagtcagtatgattatgaagctgcgagactttctatagtttcaagcgtggttcag
acttattttaattttgtaaatgcaaatgaaaatgaaaaagctttaaaagatgcttatgaa
tctgcacaagaagtttatcaaattaattatgaaaaatttcaagtaggagcagtaggagaa
tatgaaatcgcgcaatcaagagcaaatttagaaagtactgctttacaatacaatgaagca
aaattaaataaagaaaactatcttaaagctttaaaaattctaacttcaaatgatttaaac
gatattctttatcaagatcaagcttatcaggtttttaaactcaaagattttgatataccg
agcggaatttcaagcactatactcttgcagcgtcctgatattggatcttctttagagaaa
cttactcaacaaaattatctagtaggagtagctcgtacagctttcttgcccaatctttct
ttaacaggcttattaggatttgaaagcggggatttaaatacacttgtggaagcgggctct
aggacttggagtataggtgggaatttcgtaatgccaattttccactggggagaaatttat
caaaatgtgaatttagcaaaactcaacaaagatgaagcttttgtaaattatcaaaatacc
ttagttgcagcttttggagaaattcgctatgctttaattgcaagaaagactattcgcttg
caatacaataacgcacaagcaagcgaattatcctacaaaagaatttacgaaataagcaaa
gagcgttatgatgtgggcgaaatgtctttgcaagactatctacaagcgcgtcaagactgg
ttaaatgctacagttgcttttaataataccaaatattcttatgctaattctatagtcaat
gttatcaaagcctttggtggcggatttgaacaaggtgaaaatatcagcaaaaatatagaa
gaagaatcaaaaactttagatatgtcctttagagagtaa
DBGET
integrated database retrieval system
