Clostridioides difficile 630: CD630_23410
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Entry
CD630_23410 CDS
T00487
Symbol
abfD
Name
(GenBank) Gamma-aminobutyrate metabolism dehydratase/isomerase [includes: 4-hydroxybutyryl-coa dehydratase; vinylacetyl-coa-delta-isomerase]
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
cdf
Clostridioides difficile 630
Pathway
cdf00650
Butanoate metabolism
cdf00720
Other carbon fixation pathways
cdf01100
Metabolic pathways
cdf01120
Microbial metabolism in diverse environments
cdf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
cdf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CD630_23410 (abfD)
09102 Energy metabolism
00720 Other carbon fixation pathways
CD630_23410 (abfD)
Enzymes [BR:
cdf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
CD630_23410 (abfD)
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
CD630_23410 (abfD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
TRCF
Motif
Other DBs
NCBI-ProteinID:
CAJ69228
UniProt:
Q185L4
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All DBs
Position
complement(2707639..2709135)
Genome browser
AA seq
498 aa
AA seq
DB search
MALMTGAQYIESLRKLNTKVYMFGEEVKNWVDHPMIRPSINCVAATYDLAHDPEYADLMT
VTSNITGEKINRFGHLHQSVDDLIKKVKMQRLCGQKTASCFQRCVGMDAFNAVYSTTFEC
DKAHGTNYHDNFVKYLTYIQENDLVVDGAMTDPKGDRSLSPSAQPDPDMFLHIVERREDG
IIVRGAKAHQTGSINSHEHLIMPTISMTEADKDYAVSFAVPSDAEGVFMIYGRQSCDTRK
LEEGADVDLGNKEFGGQEALVVFDNVFVPNDRIFLCGEWDFSGMLVERFAGYHRQSYGGC
KVGVGDVIIGAAALAADYNGANKASHIKDKLIEMTHLNESLYCCGIACSSEGHKTEAGNY
QIDLLLANVCKQNVTRFPYEIVRLAEDIAGGLMVTMPSEKDFKSDLKVGTSGMTIGEVCN
KYFKASSVASTEERMRILRFLENICLGSSAVGYRTESMHGAGSPQAQRIMISRQGNINQK
KELAKKIAGIKKEEALNL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcattaatgacaggagctcaatatattgaaagtttgagaaaattaaatactaaggtt
tatatgtttggtgaagaggttaagaattgggttgaccatcctatgattagaccatctata
aattgtgtagcagcaacttatgacttagctcatgacccagaatatgcagatttaatgaca
gttacttcaaatatcacaggtgaaaaaataaatagatttggtcatcttcatcaaagtgtt
gatgatttgataaaaaaagtaaaaatgcaaagactatgtggtcaaaaaacagcttcttgt
ttccaaagatgtgttggtatggatgcgtttaatgcagtgtattcaacaacatttgagtgt
gataaagcccatggaactaattatcatgataattttgtaaaatacttaacttatatacaa
gaaaacgatttagtagttgatggagctatgactgaccctaagggagatagaagtctatca
cctagtgctcaacctgacccagatatgttccttcatatagtagaaagaagagaagatggg
ataattgtaagaggagcaaaggcacatcaaactggttcaataaattcacatgagcacctt
ataatgcctactataagtatgactgaagcagataaagactacgctgtatcatttgcagtt
ccttcagatgctgaaggagtgtttatgatttatggaagacaatcttgtgacactagaaaa
ttagaagaaggtgcagatgttgatttaggaaataaggagtttggaggtcaagaagcttta
gtagtatttgataatgtatttgttccaaatgatagaattttcttatgtggagaatgggat
ttctctggtatgttagtagagagatttgcaggataccatagacaaagttatggtggatgt
aaagtaggagtaggtgatgtaataataggagcagcagctttagcagctgattataatgga
gcaaacaaagcttcacatataaaagataaactaatagaaatgactcaccttaatgaaagc
ttatattgctgtggtatagcatgttcatcagaaggtcacaaaacagaagctggaaactat
caaatagatttacttcttgcaaatgtgtgtaaacaaaatgtaactagatttccttatgaa
atagtaagacttgcagaagatatagctggagggcttatggttactatgccttcagaaaaa
gactttaaatcagaccttaaagttggaacaagtggaatgactattggcgaagtatgtaac
aagtattttaaagcttcttcagtggcttcaacagaagaaagaatgagaatattaagattc
ttagaaaatatatgccttggttcatctgctgttggttatagaactgagtcaatgcatggg
gcaggttcaccacaagctcaaagaataatgatttcaagacaaggaaacataaatcaaaag
aaagaattagctaagaaaattgcgggaataaaaaaagaggaagctttaaatttataa
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