Clostridioides difficile R20291: CDR20291_3179
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Entry
CDR20291_3179 CDS
T00998
Symbol
fdhF
Name
(GenBank) formate dehydrogenase h
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00680
Methane metabolism
cdl00720
Other carbon fixation pathways
cdl01100
Metabolic pathways
cdl01120
Microbial metabolism in diverse environments
cdl01200
Carbon metabolism
Module
cdl_M00377
Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)
cdl_M00618
Acetogen
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
CDR20291_3179 (fdhF)
00680 Methane metabolism
CDR20291_3179 (fdhF)
Enzymes [BR:
cdl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
CDR20291_3179 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
CDR20291_3179 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
SIS
Motif
Other DBs
NCBI-ProteinID:
CBE07062
UniProt:
A0A9R0BNC1
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All DBs
Position
complement(join(3792004..3793731,3793735..3794148))
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AA seq
713 aa
AA seq
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MEKKILTVCPYCGAGCQLYLVVKDNKILRAEPANGRTNQESLCLKGRYGWDFLNDPKILT
PRLKKPMIRKQGVLEEVEWDEAINYTASRLNEIKEKYGPDSIMGTGSARGPGNEANYIMQ
KFMRATIGTNNVDHCARVHAPSVAGLAYSLGSGAMSNSIPEIENADVLFIFGYNGADSHP
IVANRIVKAKKNGAKLIVTDPRVTESARIADIHLPIKGGTNMVLVNAFGNVLIEEGLYNK
EFVQNHTQGFDEYKEIVKPYTAKYAEKITGIPEELIRKAMREYAKGKKAMILYGMGVCQF
GQAVDVVKGLASIALLTGNFGRESVGIGPVRGQNNVQGACDMGALPNVYPGYQNVTDDKI
REKFEKTWGVKLSPNNGYSLTQVPDLVLKEKKLKAYYIFGEDPVQSDPDASEVREALDEL
EFVIVQDIFMNKTALHADVILPATSWGEHEGVYTCADRGFQLMRKAIEPQGDVKPDWQII
SEISTAMGYPMNYKNTKEIWDELRQLCPSFLGATYEKIETQGCVQWPCKSESMEDKGTMY
LYEGQKFSTPNGKGNLFAAEWRPPMEVEDDEYPFSLCTVREVGHYSVRTMTGNCRTLSSL
EDEPGRVQINSNDAEKLGIEDDELVRISSRRGSVITRATVTDRVKEGATYMTYQWWVGAC
NELTIANLDPISKTPEYKYCAVKLEKLEDQELAEKCVREEYQSLKDKMTATNI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaaattttaacagtttgtccatactgtggagctggatgccaattatatcta
gtagtaaaagataataagatattaagagctgaaccggctaatggtagaacaaatcaagaa
agtttgtgtttaaaaggtcgttatggatgggattttctaaatgaccctaaaattctaaca
cctaggctaaaaaagccaatgataagaaaacaaggtgtactagaagaggttgaatgggat
gaggctataaactatacagcttcaagactaaatgaaattaaagaaaaatatggacctgat
tctattatgggaacaggttctgcaagaggacctggtaatgaagcaaactatataatgcaa
aaatttatgagagctacaataggaactaataatgttgaccattgtgctcgtgtacatgca
ccatctgtagccggtctggcttactcattaggtagtggtgcaatgtctaattctatacca
gagatagaaaatgcagatgttttatttatatttggatataatggagcagattcacatcca
atagtggcaaatagaatagtaaaagctaaaaaaaatggtgctaaattaattgttactgac
cctagagtaactgaatctgcaagaattgctgatatacatctacctataaaaggtggaaca
aacatggttttagtaaatgcttttggaaatgtattaatagaagaaggtctttacaataaa
gaatttgttcaaaatcatacacaaggatttgatgagtataaagaaattgttaaaccatat
acagctaaatatgctgaaaagattacaggaatcccagaagagcttataagaaaagctatg
agagaatatgcaaaagggaaaaaagctatgatactttatggaatgggtgtctgtcaattt
ggtcaagctgttgatgtagttaagggacttgcatcaattgctctacttacaggtaatttt
ggtagagaaagcgttggaataggacctgtacgtggacaaaataatgttcaaggagcttgt
gatatgggagctcttcctaatgtatatcctggctatcaaaatgtaactgatgataagata
agagaaaagtttgaaaaaacttggggggtaaaattatctcctaataatggttatagttta
actcaagttccagacttagtactaaaagagaaaaagcttaaagcttattatatatttgga
gaagacccagtgcaaagtgacccagatgcatcagaagttagagaagcattagatgaattg
gaatttgtcattgttcaagatatatttatgaataagacagcacttcacgctgatgttata
cttccagctacttcttggggagaacatgagggagtatatacatgtgcagatagaggattc
caattgatgagaaaagctatagagccacaaggagatgtaaaaccagactggcaaattata
agcgaaatttctacagcaatgggatatcctatgaattataaaaatactaaggaaatatgg
gacgaacttagacaattatgtccaagtttcttaggtgctacttatgaaaagatagaaact
caaggatgcgttcaatggccttgtaagagtgaaagtatggaagataaaggaactatgtat
ctgtatgaaggtcaaaagttttctactcctaatggtaaaggtaatttgttcgctgctgaa
tggagaccccctatggaagttgaagatgatgaatacccatttagtttatgtactgtaaga
gaagttggacactattcagtaagaacaatgactggtaattgtagaacacttagttcatta
gaagatgaaccaggacgtgttcaaataaattctaatgatgctgaaaaattaggaattgaa
gatgatgaattagttagaattagttcaagaagaggaagtgtaataacaagagcaacagtt
actgatagagttaaggaaggtgcaacatatatgacttatcagtggtgggttggagcttgc
aatgaacttacaatagcaaatttagaccctatatctaaaacaccagagtataaatattgt
gctgttaaacttgaaaaacttgaagaccaagaattagcagaaaaatgtgtaagagaagag
tatcaaagtttgaaagacaaaatgacagctacaaatatctaa
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