Castellaniella defragrans: BN940_12071
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Entry
BN940_12071 CDS
T03058
Name
(GenBank) Outer membrane component of tripartite multidrug resistance system
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cdn
Castellaniella defragrans
Pathway
cdn01501
beta-Lactam resistance
cdn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cdn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN940_12071
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BN940_12071
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdn02000
]
BN940_12071
01504 Antimicrobial resistance genes [BR:
cdn01504
]
BN940_12071
Transporters [BR:
cdn02000
]
Other transporters
Pores ion channels [TC:
1
]
BN940_12071
Antimicrobial resistance genes [BR:
cdn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BN940_12071
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BN940_12071
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BN940_12071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6725
Filament
Motif
Other DBs
NCBI-ProteinID:
CDM24872
UniProt:
W8X4K0
LinkDB
All DBs
Position
2606260..2607750
Genome browser
AA seq
496 aa
AA seq
DB search
MKPLIPLLLALSLSACAPMDPGTPATRALDAQTLGLSDDAIAWPGERWWTRYQDPQLDGL
IDQALRSNPSLDAAAARVRAARAAARGARAVQWPQVNANYHLTRQRYSENYIYPPPLGGS
YQTDTGLGLQLDFDLDLWGRQRALTGAAVQRAAAAEASRRQARVLLVSAVAQAYFQLQNA
RAQADAIGHIASKLQEALDITRDRYRNGLGTQVDVDQADSAVSSARVQLSQARNNAQLLH
HQLAALLGQSPEQLPDLAARPGAALPPDVPGHLPMALLGRRADITAARLQAEAAGAEVSA
AKADFLPNIDLSASFGYLSLGLDKLVRGSSENYGAGPVITLPIFNAGGLNARLEGRRAER
DEAIARYNETILGALREVADARDSIHSLQDQIRHQEASMKAIASAYDVALSRYKAGLGDF
VQVLLAQSEALKQTVQTTDLHARAYILDVQLATALGGGYVQDDGAPRAAGGNPAAGNPAP
SAPAAGQPAATHPTQP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctcatccccctgctgctcgccctgtcgctttccgcctgcgcccccatggac
ccgggcacgcccgccacccgcgcgctcgacgcccagaccctgggtttgtccgacgacgcc
atcgcctggcccggtgaacggtggtggacgcgctaccaggacccgcaactggacggcctg
atcgaccaggcgctgcgctcgaacccgtccctggacgccgccgccgcccgcgtgcgcgcc
gcccgggccgccgcgcgcggcgcccgcgccgtgcagtggccgcaggtcaatgccaactac
cacctgacgcggcagcgctacagcgagaactacatctatccgccgcccctgggcggctcg
taccagaccgacaccggactggggctgcagctggacttcgacctggacctgtggggccgc
cagcgcgcgctgaccggcgccgccgtccagcgcgccgccgcggccgaagcctcgcgccgg
caggcccgcgtgctgctggtctcggcggtcgcccaggcctatttccagctgcagaacgcc
cgcgcccaggccgacgccatcggccacatcgccagcaagctgcaggaagccctggacatc
acccgcgaccgctacaggaacggcctgggcacccaggtggacgtggaccaggccgactcg
gcggtctcgtccgcgcgggtgcagctcagccaggcgcgcaacaatgcccagctgctgcac
caccagctcgccgccctgctgggccagtcgcccgagcaactgccggacctggccgcgcgc
ccgggcgccgcgctgccgcccgacgtgcccggccatctgcccatggccctgctgggccgg
cgcgccgacatcaccgccgcccgcctgcaggccgaggcggccggcgcggaagtctccgcc
gccaaggccgatttcctgcccaacatcgacctgtcggccagcttcggctacctgtcgctg
ggtctggacaagctggtgcgcggcagcagcgagaactacggcgccggcccggtcatcacc
ctgccgatcttcaacgccggcggcctgaacgcccggctggaaggccgccgcgccgagcgc
gacgaggccatcgcccgctacaacgagaccatcctgggcgccctgcgcgaggtggccgac
gcgcgcgactcgatccattcgctgcaggaccagatccgccaccaggaagccagcatgaag
gccatcgcctcggcctacgacgtggccctgagccgctacaaggccggcctgggcgacttc
gtgcaggtgctgctggcgcagagcgaggcgctgaagcagaccgtgcagaccaccgacctg
cacgcccgcgcctacatcctggacgtgcagctggcgaccgccctgggcggcggctacgtc
caggacgacggcgcgccgcgcgccgccggcgggaatccggccgccgggaatccggcccct
tcggctccggccgccgggcagcccgccgccacgcatccgactcaaccgtga
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