Dickeya fangzhongdai ND14b: LH89_08185
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Entry
LH89_08185 CDS
T03347
Name
(GenBank) hypothetical protein
KO
K12340
outer membrane protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced01501
beta-Lactam resistance
ced01503
Cationic antimicrobial peptide (CAMP) resistance
ced02020
Two-component system
ced03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LH89_08185
09132 Signal transduction
02020 Two-component system
LH89_08185
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LH89_08185
01503 Cationic antimicrobial peptide (CAMP) resistance
LH89_08185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_08185
02044 Secretion system [BR:
ced02044
]
LH89_08185
01504 Antimicrobial resistance genes [BR:
ced01504
]
LH89_08185
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_08185
Secretion system [BR:
ced02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LH89_08185
RTX toxin transporter
LH89_08185
Multiple protein transporter
LH89_08185
RaxAB-RaxC type I secretion system protein
LH89_08185
Antimicrobial resistance genes [BR:
ced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LH89_08185
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LH89_08185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIR69184
LinkDB
All DBs
Position
complement(1885471..1886871)
Genome browser
AA seq
466 aa
AA seq
DB search
MLCVAHQPQAIAADIFGTDAEIPPTAATPLGKNPSCQFGPVKQPLLLTDAVERSLCNNPK
TGEAWAQIKAQAAALGTAKGAYLPTLSLSGQHIKEDSKTVVPGHSEFNSNNSSPNYSSSV
SLSWVLYDFGGRSAALDKARALLVAAQTNHLQALQTIFITTAKDYYNAQAAAGELAAALE
TERIARKSLDVVISKEAHGAASMGDELQARTAYLQARANRTKSEGNWQSDIGILAGDLAL
RPDTPISLPAVDDGVKPDSDFQKSVSALINEATRIHPGILAAQAQLKAAEADVNQTKAEG
MPSLSLIVKSSHDNQRVNEGLGQPYFKARHTDNYVGVQVSVPLFEGFTREYKVREGIAHV
EEKQHSLDDMRNNVELDVWKSYQSLKVATSNLPVTHDLLLTAQRSYDAAEHRYENGVGSI
LELLNTQTALSNAEKQHIQSLTDWRYSRLELAEKLGYLGLESVGEK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtgtcgctcatcaaccacaggcgattgccgcagatatattcggtacagatgca
gaaattcctccgacagcagcgactcccttgggaaaaaatccgagttgccagtttggaccg
gtgaagcaaccactgctattaactgacgcggttgagcgttctttgtgtaataaccccaaa
accggagaagcctgggcgcaaataaaagcgcaggctgctgcgctaggtacagctaaaggt
gcctatttaccgacactctcgttaagcggacagcatattaaagaagactcaaaaacggta
gttccaggtcattcggaatttaattcaaacaattcctcccctaattattccagtagcgta
tctttgagttgggtactttatgattttggcggtcgctcggcagcactcgacaaagccagg
gcgttgcttgttgctgcccaaaccaatcatctgcaagcgcttcagacgatttttattacc
acagcgaaagattattacaatgcgcaggctgccgcgggggaactagccgctgcgttagag
acagagcggattgcccggaaaagccttgatgttgtgattagtaaggaagcgcatggtgct
gcatcaatgggggatgagttacaggcaagaacagcctatttgcaagccagagcaaatcgc
acaaagtctgagggaaattggcagtctgatataggtattcttgctggagatctggcgttg
aggccagacacgcccatttcattacctgccgttgatgacggtgttaaacccgatagtgat
tttcagaaatcagtatcggcgttgattaatgaagcaacacgtatccaccctgggattctg
gctgcacaggcgcaacttaaagcagctgaggcggatgttaatcagactaaagctgaagga
atgcctagcctaagccttatcgtaaaatccagtcatgacaatcagcgcgtgaatgaagga
ttgggccagccttattttaaggcaaggcatactgataattacgtgggggttcaggtatca
gtacccttatttgaagggtttactcgagaatataaagtcagggaaggtattgctcatgtc
gaggaaaaacaacactctctggatgatatgcgcaataacgttgagcttgatgtatggaaa
agttatcagtcattgaaggtggcgacgagtaacctgcctgtaacccatgaccttcttttg
actgcacaacgatcttacgatgctgcggagcatcgctatgagaacggtgtgggaagcatt
cttgagttactcaatacgcaaaccgcgttgtctaatgctgaaaagcaacacatccaatct
ttgactgactggcgctatagccggttggaactagctgaaaaattaggttatttaggattg
gaaagcgtgggggagaagtga
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