Dickeya fangzhongdai ND14b: LH89_10485
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Entry
LH89_10485 CDS
T03347
Name
(GenBank) membrane protein
KO
K12340
outer membrane protein
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced01501
beta-Lactam resistance
ced01503
Cationic antimicrobial peptide (CAMP) resistance
ced02020
Two-component system
ced03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LH89_10485
09132 Signal transduction
02020 Two-component system
LH89_10485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LH89_10485
01503 Cationic antimicrobial peptide (CAMP) resistance
LH89_10485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_10485
02044 Secretion system [BR:
ced02044
]
LH89_10485
01504 Antimicrobial resistance genes [BR:
ced01504
]
LH89_10485
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_10485
Secretion system [BR:
ced02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LH89_10485
RTX toxin transporter
LH89_10485
Multiple protein transporter
LH89_10485
RaxAB-RaxC type I secretion system protein
LH89_10485
Antimicrobial resistance genes [BR:
ced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LH89_10485
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LH89_10485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
4HFCP_synth
Ribosomal_S5_C
CDPS
Motif
Other DBs
NCBI-ProteinID:
AIR69612
LinkDB
All DBs
Position
2396158..2397570
Genome browser
AA seq
470 aa
AA seq
DB search
MKKLLPLLISLGLGGFSAVSQAEDLLQVYQQAKTTNPDLRSAAANRDAAFEKINEARSSL
LPQLGLGADYTYNSGYRDRRDINSNVTSASLQLTQSIFNMSLWRALTLQEKQAGIQDVSY
QTSQQTLLLNTATAYFSVLRAIDSLSYVSAQKQSIYRELDQTTQRFNVGLVAITDVQNAR
AQYDSVLASEVTARNNLDNAMETLRQVTGQFYPQLAGLNIDRFSPQKPDAVNGLLKEAEN
RNLSLLSARLSQDLAREQIRSAESGHLPTLNLTASTGVTNTDYSGSRAVGDNFNNTYVGQ
NQVGLSFSLPIYSGGGTSSRVKQAQHSFVASSESMESAHRSVIQTLRSAHNNISASISSV
NAYKQAVISAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSGARYDYLINQLNLK
QALGTLNEEDLRTLNAMLGKPVSTSAAIGDDAPAPTTTPAAAKTAAKAKP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgctcccacttctcatcagcctgggtctgggcggctttagcgccgtaagt
caggccgaagacttgttacaggtttaccagcaggccaaaacgaccaatccggatttacgc
agcgctgccgccaaccgagacgcggcttttgagaaaattaatgaagcccgttcgtccctg
ctgccgcagttgggtttgggcgcggactacacctacaacagcgggtaccgcgaccgcaga
gacattaacagcaatgtaaccagcgcctcgctgcagttgacccagtcaatctttaatatg
tcgctgtggcgcgctctgacgctgcaggaaaaacaggccggcattcaggacgtcagctac
cagacatcccagcagacgctgctgctcaataccgcgaccgcttatttcagcgtgctgcgc
gctattgattcgttgtcttacgtcagcgcccagaagcagtcgatttaccgcgaactggac
cagaccacccaacgtttcaacgtcggcctggtcgccatcaccgacgtgcagaacgcccgc
gcccaatatgacagcgtgctggcaagcgaagtgaccgcgcgcaacaatctggacaacgcg
atggaaactctgcgccaggtgaccggccagttctatccgcagttggcagggctgaatatc
gatcgcttcagcccgcagaaacccgatgcggtgaacggcctgctgaaagaagcggaaaac
cgcaacctcagcctgttgtcggcccgtctgagccaggatctggcgcgcgagcagattcgt
tccgcggaaagcggccacctgccgacgcttaatctgactgcgtccaccggcgttaccaac
accgattactccggttcccgcgcggtaggcgacaatttcaacaacacctatgtgggccag
aatcaggtcggactgagcttctccctgccgatctacagcggcggcggcacctcatccaga
gtgaaacaggcgcaacacagctttgtggcatccagcgaaagcatggaaagcgcgcaccgc
tcggtaattcagacgctgcgctctgcgcataacaacatctctgcctccatcagcagcgtt
aacgcttacaaacaggcggtgatctcggcgcagagctcgttggacgcaatggaagccggc
tatcaggtgggcacccgcaccatcgtcgatgtgttggacgccaccaccacgctgtacaac
gccaagcagcagttgtccggcgcccgttatgactacctgatcaaccagctgaacctcaag
caagcgctcggtacgttgaacgaagaggacctgcgcaccctgaacgccatgctgggcaaa
ccggtatctacgtccgccgccatcggcgacgatgcgccggcgccgacaaccacgccagcg
gcagcaaaaaccgccgccaaggccaagccctga
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