Dickeya fangzhongdai ND14b: LH89_19980
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Entry
LH89_19980 CDS
T03347
Name
(GenBank) transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ced
Dickeya fangzhongdai ND14b
Pathway
ced01501
beta-Lactam resistance
ced02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH89_19980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LH89_19980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ced02000
]
LH89_19980
01504 Antimicrobial resistance genes [BR:
ced01504
]
LH89_19980
Transporters [BR:
ced02000
]
Other transporters
Pores ion channels [TC:
1
]
LH89_19980
Antimicrobial resistance genes [BR:
ced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LH89_19980
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LH89_19980
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LH89_19980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribonuc_red_lgN
Motif
Other DBs
NCBI-ProteinID:
AIR71378
LinkDB
All DBs
Position
4492593..4493990
Genome browser
AA seq
465 aa
AA seq
DB search
MRVIMTLLTGAMLLSGCSLDPHYQRPSAPVPDAWPQGAAYHAAAAARQPADDIPWREVLV
DDRLRQVVDMALSDNRDLRKAIADVEAARAQLGEKRATLLPTINAGIEGDRSRSLSSSGN
GTVLSSSYGASLSTSAFTLDLFGKNRSLTGAAREAYLSSAATATSTRLTLIADTSTAWVA
LATARSNLALARQTMESAGQSLAVTRSRLRNGVASAVDVAQAETVYQQARADVASALTTE
AQDKNALDLLAGRPVPEALLPADVASLAQAVKPVAAGISSVALLRRPDVQAAEHTLKSAN
ANIGAARAAFFPSITLTASNGLSSEALSSLFSGGAHVWSLAPAVSLPIFDGGANLSALRY
AEAEKQGYVASYEKTLQTAFREVADALARKGTIDEQQAAQRDYVAAAERSYQLASNRYQA
GVDTYLNVLDAQRTLYSARQSSLSLEQSRLDNLITLYNVLGGGVK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttattatgacgttactgaccggcgctatgctgttatccggctgttcgctggat
ccgcactatcagcggccgtccgcgccggtgcctgacgcctggccgcaaggggcggcctat
catgcggcggcggcggcccgccagccggcggatgatatcccgtggcgcgaggtgctggtg
gacgatcgcctgcgtcaggttgtcgacatggcgttgtcggacaaccgtgatctgcgcaaa
gcgattgccgatgtggaagcggcgcgcgcgcagcttggcgaaaagcgcgcgacgctgctg
ccgaccatcaacgccgggatagagggcgatcgcagccgttcgctcagcagcagcggcaac
ggtacggtattgagcagcagctacggcgccagcctgtccaccagcgcttttacgctggat
ttgtttggtaaaaaccgcagcctgaccggcgcggcgcgggaggcgtatctgtccagtgcc
gccaccgccaccagcacccggctgacgttgatcgccgatacgtccaccgcctgggtggcg
ctggcgaccgcccgcagcaatctggcgctggcgcgtcagacgatggagagcgccgggcag
tcgctggcggtgactcgcagccggttgcgtaacggcgtggcgtcggcggtggatgtagcg
caggcggaaaccgtctaccagcaggcgcgggcggacgtcgccagcgcgctgaccaccgaa
gcgcaggataagaatgcgctggacctgctggccgggcgcccggtgccggaggcgctgttg
cctgcggatgtggcgtcgctggcgcaggcggtgaaaccggtagccgccggcatttcgtcc
gtcgcgctgttgcgccgtccggatgtgcaagcggcggaacataccctgaaatcggccaac
gccaatatcggcgcggcgcgggcggcgttcttccccagcattacgctgaccgccagcaac
ggcctgagcagcgaggcgctgtcgtcgctgtttagcggcggcgcgcacgtctggtcgctg
gcgccggccgtcagcctgcctatcttcgacggcggcgccaacctgtcggcgttgcgctat
gccgaggcggaaaaacagggctatgtcgccagttacgagaaaacgttgcagaccgcgttt
cgcgaagtggccgacgcgctggcgcgcaaaggcactattgatgaacagcaggcggcgcaa
cgcgattacgtggcggcggccgagcgcagttatcaacttgccagcaaccgttaccaggct
ggggtcgatacctatctcaacgtactggatgcccagcgtacgctgtacagcgcccgtcag
tcgtcgctcagcctggaacagtcgcggctggataatctgattacgctgtataatgtgttg
ggcggtggggtgaaataa
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