Canis lupus familiaris (dog): 489428
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Entry
489428 CDS
T01007
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03320
PPAR signaling pathway
cfa04657
IL-17 signaling pathway
cfa04926
Relaxin signaling pathway
cfa05171
Coronavirus disease - COVID-19
cfa05200
Pathways in cancer
cfa05219
Bladder cancer
cfa05323
Rheumatoid arthritis
cfa05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
489428 (MMP1)
09152 Endocrine system
03320 PPAR signaling pathway
489428 (MMP1)
04926 Relaxin signaling pathway
489428 (MMP1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
489428 (MMP1)
09162 Cancer: specific types
05219 Bladder cancer
489428 (MMP1)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
489428 (MMP1)
09163 Immune disease
05323 Rheumatoid arthritis
489428 (MMP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
489428 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfa01002
]
489428 (MMP1)
Enzymes [BR:
cfa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
489428 (MMP1)
Peptidases and inhibitors [BR:
cfa01002
]
Metallo peptidases
Family M10
489428 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Metallopep
DUF4953
Peptidase_M66
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
489428
NCBI-ProteinID:
XP_546546
Ensembl:
ENSCAFG00000015054
VGNC:
43273
UniProt:
A0A8P0ST47
A0A8I3RPH1
LinkDB
All DBs
Position
5:28926897..28935120
Genome browser
AA seq
465 aa
AA seq
DB search
MLSLPLLLLLLWGVVSHGFPTVTSETQEQDVEMVQNYLEKYYYLKSDGKPVVRQRNNSLV
SEKLKQMQAFFGLKVTGKVDTDTLNLMKQPRCGVPDVAQYVLTDGSQWDHTHLTYRIENY
TPDLPRAEVDSAIEKAFQLWSNVSPLTFTKVFEGQADIMISFVWGDHRDNSPFDGPNGNL
AHAFQPGPNLGGDIHFDEDETWTNNFRNYNLYRVAAHELGHSLGLSHSTDIGALMYPNYM
YSGNVQLSQDDINGIQAIYGPSQNPVQPTGPQTPQVCDRKLTFDAITTIRGEVMFLKDRF
YMRVNPFYPEVELNFISVFWPNLPNGLQAAYEVSERDEVRFFKGDKYWVVQGQDVLYGYP
KDIHRSFGFPRTVKSIDAAVSDENTGKTYFFVANKYWRYDEYKQSMDAGYPQMIAADFPG
IGHKVDAVFQKDGLFYFFHGKRQYKFDLRTKRVLSLDKANSWFNC
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccttcctctgctgctgctgctgctctggggcgtggtgtcccacggcttccca
acagtgacttcagagacacaggagcaagatgtggagatggtccagaactacttggaaaag
tattactatctgaagagtgatgggaagccagttgtgaggcagaggaacaacagcttagtg
tctgagaagctgaagcaaatgcaggcgttctttgggctgaaggtgactggaaaggtcgac
acggacaccctgaatctgatgaagcagcccagatgtggggtgcccgatgtggctcagtac
gtcctcactgatgggagccaatgggaccacacgcatctgacctacaggattgaaaattac
acaccagatttgccgagagcagaggtagacagtgccattgagaaagcctttcagctctgg
agtaacgtctctcccctgaccttcaccaaggtctttgagggtcaagcagacataatgatt
tcctttgtctggggagatcaccgtgacaattctccctttgatggacccaatggaaacctc
gctcatgcttttcaaccaggcccaaatctaggaggggatattcattttgatgaagatgaa
acatggaccaacaatttcagaaattacaacttgtatcgcgtggcagctcatgaattgggt
cattctcttggactttctcattctactgatattggggctctgatgtaccctaactacatg
tatagtggcaatgtccagctatctcaggacgacatcaatggcatccaggccatatatgga
ccttcccaaaatcctgtccagccaacaggcccccaaaccccacaagtgtgtgatagaaag
ctaacttttgatgctatcactacaattcggggagaagtgatgttccttaaagacaggttc
tacatgcgcgtaaatcccttctatccggaagttgagcttaatttcatttctgttttctgg
ccaaacctgccaaacggacttcaggctgcttatgaagtctctgagagagatgaagtccgg
tttttcaaaggtgataagtactgggttgttcagggtcaggatgtgctatatggatacccc
aaggacatccacagatcctttggcttccctagaaccgtgaagagcatcgatgctgctgtt
tctgacgaaaatactgggaaaacatatttctttgttgctaacaagtactggaggtatgat
gaatataagcaatccatggatgcaggttatccccagatgatagcagctgactttcctggt
attggccataaagttgatgctgttttccagaaagatggacttttctacttctttcatgga
aaaaggcaatacaaatttgatcttcgaactaagagagttctgagtcttgacaaagctaat
agctggttcaactgctga
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integrated database retrieval system
