Coprobacter fastidiosus: Cfast33896_22830
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Entry
Cfast33896_22830 CDS
T09127
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
cfas
Coprobacter fastidiosus
Pathway
cfas01501
beta-Lactam resistance
cfas01503
Cationic antimicrobial peptide (CAMP) resistance
cfas02020
Two-component system
cfas03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cfas00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Cfast33896_22830
09132 Signal transduction
02020 Two-component system
Cfast33896_22830
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cfast33896_22830
01503 Cationic antimicrobial peptide (CAMP) resistance
Cfast33896_22830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfas02000
]
Cfast33896_22830
02044 Secretion system [BR:
cfas02044
]
Cfast33896_22830
01504 Antimicrobial resistance genes [BR:
cfas01504
]
Cfast33896_22830
Transporters [BR:
cfas02000
]
Other transporters
Pores ion channels [TC:
1
]
Cfast33896_22830
Secretion system [BR:
cfas02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Cfast33896_22830
RTX toxin transporter
Cfast33896_22830
Multiple protein transporter
Cfast33896_22830
RaxAB-RaxC type I secretion system protein
Cfast33896_22830
Antimicrobial resistance genes [BR:
cfas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Cfast33896_22830
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Cfast33896_22830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BEG63328
LinkDB
All DBs
Position
2965877..2967343
Genome browser
AA seq
488 aa
AA seq
DB search
MKLWMICIVFLFPTCLWGQKDTLSLSMDQALNIARIFSIDAIVARNTLQIAYWSYRNYKA
DLLPSMVLDGTLPSLDKSLSSYQKEDGTYSFVTNRLLSENLNLSITQNIPYTGGSISLQS
QLQRIDQLDGDRNTSYLSVPLGLTLSQPLITARPLRWSMRIEPKKYKEALQQYCVSMEAV
NMQTVKHYFEFLLASVNKNIAEQNLKNAEELLKIAQGKKKIGIISDNDLLQLELGRLNAS
SNLIKAEQEYDNKMYAFRNYLRYDDSVVLKIDVPQKCPVVKISPREVLDIALKNNPLNYS
IERQLLEAKQQIAQARVDRGFKADIYASVGFTGSDNSLSGTYQNLQNRQVVSLGIRIPIL
DWGKGRGRVRLAKSQQELIKAQIEQSQMNFERDVTLSVNQFQDQTRLLDIAVLADSVAQC
RYKTAYNIFVMGNINVLDINSAQVERDNARREYISQLYTSWLYYYNIRQLSLYDFVRDED
IIYEMIKN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaactatggatgatatgtatagtctttctgttccctacctgtttgtgggggcagaaa
gatactttgtctctctctatggatcaggctttaaatatagctcgtattttttctattgat
gcaatcgtggcaagaaatactttgcagattgcttattggtcgtaccgtaattataaggcg
gatttgttacccagtatggttttagatggcactttgcccagcttggataagtcattgtct
tcttatcagaaagaagatggtacatattcgttcgttacaaaccgtctgctcagtgaaaat
ttgaatctttctattactcaaaatattccttatacgggaggttctatttctttacagtca
caattgcaacgtattgaccagttggacggagatcgtaatacaagttatttgagcgtccct
ttaggattgaccctttctcagcctttgattacagctcggccattaagatggtcgatgcgt
atagagcccaagaagtataaagaggcattacaacaatattgtgtaagtatggaggctgta
aatatgcagacagtcaagcattatttcgaatttttattagcatcggtaaataaaaatatc
gcagaacagaatctgaaaaatgctgaggaattgttgaaaatagctcagggtaagaaaaag
atcggaataatatcggataatgatttgctgcaactggaattaggaagattgaatgcttcg
tcaaatttgataaaagcggaacaagagtatgataataagatgtatgcttttcgaaattat
ttgcgatatgatgattctgtcgtgttgaaaattgatgttccgcaaaaatgtcctgttgta
aagatttcaccacgtgaggttttagatattgcattaaaaaataatcctttaaattattcg
atcgaaaggcagttgttagaggcaaaacagcaaattgcccaagctcgagtagatcgtgga
tttaaagcggatatttatgcttcggtaggatttacgggaagtgataatagtttatccgga
acatatcagaatttacagaatcgtcaggttgtgagtttaggaatacgtattcctatttta
gattggggaaaaggtcggggacgagtgcggttggcgaagtcgcagcaagagctcataaag
gcgcaaattgagcaaagccagatgaattttgaacgagatgtaacgttatctgtcaatcaa
tttcaagatcagacacgattgttagatattgctgttcttgcagattctgttgcacaatgt
cggtataaaacagcatacaatatctttgttatgggaaatattaatgtcttggatataaat
tcggctcaagtagaacgggataatgcccgtagagaatatatttctcagttatatacctct
tggttatattattacaatattcgacagctatccctttatgattttgttcgagatgaggat
attatatatgaaatgataaaaaattaa
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