Clarias gariepinus (North African catfish): 128519989
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Entry
128519989 CDS
T10780
Name
(RefSeq) mannan-binding lectin serine protease 2-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128519989
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128519989
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128519989
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
128519989
Peptidases and inhibitors [BR:
cgar01002
]
Serine peptidases
Family S1: chymotrypsin family
128519989
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Opsonins
128519989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
Trypsin_2
cEGF
CUB_M02D8_5_3rd
EGF
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
128519989
NCBI-ProteinID:
XP_053349975
LinkDB
All DBs
Position
4:complement(2303067..2333282)
Genome browser
AA seq
1230 aa
AA seq
DB search
MFIFWLCVVLASVSPSLAGWIQSPGFPRGYSPDLNEFWRRCAPPGHVMSLTLIHLDLEES
NECENDALKISEDGHFLANLCGKKTFEELQSSVNPSLRSSSGGCLSINFYSDYSNTERHA
GFKAFYTTQDVDECWENSEVECSHFCHNYIGGYSCSCSPGYYLDPDEHTCRANCTENRYG
AGVLTPPGSPGPYYENADCLYSLSVGEGDQIELKFTGVFDVESINGVCVDFVKVKTDTET
FGPFCGKDRPDDIHTAAQHVQVIFHSDQGGTNQGFSLQYRPKVMECSGKVTPHSTVSPVK
QRYPVGEKVTVRCEQGYAIAYRNYSFESTCLFNGKWSGIHDCEMVNCGPPDISDLMAFTE
YTGMMYHDKFSISCSTHYYHLVGNANFLCDETGDWMAKNGQNFSQITTKCVPVCGITKSS
AGGRIFGGKTAELGQIPWQLLVKEPQRGGASLINDRWAITAAHVVEKQRSLKFFGGMVDG
LDKNKVELGTETIIIHPGYDYTKSHYDNDIALVKMSSRVPLSENIMPVCLPEGKSSGPVM
EGMQGTVSGLGATSDRREKSRYLQYGHVKEYSGHCFNSNLKVTENMFCAGDTDGGVDSCK
GDSGGPLVIPMLGFGSSDTPYRLKGIVSWGPPVCGDKNYKGYYTKVENYLDWIRETMEKN
HTHTHTLTVSSTMFIFWVCVVLASVSPSIAGYIQSPGFPYGYHTNLSESWRRCAPPGHVL
ALTLLHLDLEESDKCENDALKISEDGHVLANLCGKMTFEELQSSVNPSLRSSSGGCLSIV
FHSDYSNTDRHAGFNAIYTTPANCTENRNGAGVLTSPGRPGPYFENAHCLYSLSVEEGNQ
IELKFTGVFDVESINGRCIDYVKVKTDTEIFGPFCGKDRPADILTAAQHVQVIFHSDLGG
TNQGFSLQYKPKEVNCQLPELSDLMVLNEKDPETTYKHNISIKCSTHYYNLVGHANFTCD
ATGDWVAENGQNFSQLTTKCVPVCGITKSSAGGRIFGGKTAELGQIPWQLLVKEPQRGGA
SLINDRWAITAAHVVEKQRSLKFFGGMVDGLDKNKVELGTETIIIHPGYDYTKSHYDNNI
ALIKMSSRVPLSENIMPVCLPERKSSGPVMEGRQGTISGFGATSDRREKSRYLQYGHVKE
YLGHCFNSNLKVTKNMFCAGDTDGQVDSCKGDAGGSLVIPMLGFGSSDTPYRLKGIVSWG
PPVCGDKNYKGYYTKVENYLDWIRETMEKN
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgtttattttctggttgtgtgtggtgttagcgagtgtgtccccgtctctcgccggatgg
attcagtctcctgggtttccccgcggatacagtccggacttaaatgaattttggagacgt
tgtgcaccgcctggtcacgtcatgtccctcacactgatccatctggacctggaggagagc
aacgagtgtgagaacgatgccctgaagatttctgaggatggccatttccttgctaacttg
tgtggcaaaaagaccttcgaggagctccagtcgtctgttaatccctcgctccgctcgtcc
tctggaggctgtctctctatcaacttctactccgactactccaacacggagagacatgca
ggattcaaggctttttacacaacccaggatgtcgatgagtgctgggagaacagtgaggtg
gagtgttcgcatttctgtcacaattacatcggaggctacagttgcagctgcagtccgggt
tactacctggacccggatgaacacacatgccgagccaactgcacagagaatcgttacgga
gctggagtgttgacgcctcctggcagtcccgggccatactacgagaatgcagattgttta
tacagtctctctgtgggtgaaggagatcaaatcgagttaaagttcactggagtgtttgat
gtggaaagcataaatggagtctgcgtcgactttgtcaaagttaagacggacacagagacc
tttgggccattctgtgggaaggacagacctgatgacatccacaccgcagcccaacacgtt
caagtcatcttccactccgatcaggggggaacaaaccaaggcttctctcttcagtacaga
cctaaagtaatggaatgttctggaaaagtgacaccccattccactgtatctcctgtgaaa
caacgctatccggtgggcgagaaagtcactgtgcgctgtgagcagggatacgctatagct
tatagaaattacagttttgaatccacgtgtctgtttaacgggaagtggagtggcatacac
gactgtgaaatggtgaactgtgggccgcccgacatttcagacctgatggcgtttactgaa
tacacagggatgatgtaccatgacaaattcagtataagttgctctacacactactaccat
cttgttggaaatgccaacttcctttgtgatgagacaggagactggatggctaaaaatgga
cagaacttttcacaaattaccacaaagtgtgttccagtatgtggcataactaaatcatct
gctggtggaagaatctttggggggaaaactgccgaactggggcaaattccctggcagctc
ctagtgaaagaacctcagcgaggaggtgcatctctaattaatgaccgctgggccatcacg
gctgctcatgtagtggaaaagcagagatcactgaagttctttggaggaatggtggatggt
ctagacaagaataaggttgaattgggaacggagacgatcataattcaccccggctatgat
tatacaaaaagtcattatgataatgatatcgccttggtcaagatgtcttctcgagtccct
ctcagtgaaaatatcatgcccgtgtgtcttccagagggaaaaagtagtggaccagtgatg
gagggaatgcaggggacagtctcaggcttaggtgcgacatcagacaggagggaaaagagt
cgatatttgcaatatggtcatgttaaagaatactcaggtcactgttttaattctaatctt
aaggtcactgagaacatgttctgtgctggagacactgatggaggtgtggacagctgtaaa
ggagacagtgggggtccactcgttatcccaatgctggggtttgggtcttctgacacacca
taccgcctcaaggggattgtgtcatggggtccaccagtgtgtggagataaaaattataaa
ggttattacaccaaagtggagaattacctggactggatcagagaaacgatggagaaaaat
cacacacacacacacacactcaccgttagttcgaccatgtttattttctgggtgtgtgtg
gtgttagcgagtgtgtccccgtctatcgctggatatattcagtctcctgggtttccctac
ggataccacacaaacttgtctgaatcgtggaggcgttgtgcaccgcccggtcacgtcctg
gccctcacactgctccacctggacctggaggagagtgacaagtgcgagaacgatgccctg
aagatttctgaagatggccacgtcctcgctaacttgtgtggcaaaatgacctttgaggag
cttcagtcatctgttaatccctcgctccgttcgtcctctggaggctgtctctctatcgtc
ttccactccgactactccaacacggacagacacgcaggatttaatgctatttacacaacc
ccagccaactgcactgagaatcgtaatggagctggagtgttgacgtctcctggcagacct
gggccatacttcgagaatgcacattgtttatacagtctctctgtggaggaagggaatcaa
attgagttaaaattcactggagtgtttgatgtggaaagcatcaatggacgctgcattgac
tatgtcaaagttaagacagataccgagatctttgggccattttgtgggaaggacagacct
gctgatatcctcactgcagcccaacacgttcaagtcatcttccactccgatctgggggga
acaaaccaaggcttctctcttcagtacaaacctaaagaagtgaactgtcagcttcctgaa
ctttcagatctgatggtgttgaatgagaaagacccagagacgacctataagcacaacatc
agtatcaagtgctctacacactactacaatctggttggacatgccaacttcacgtgtgat
gctacaggagactgggtggctgaaaatggacagaatttttcacaacttaccacaaagtgt
gttccagtatgtggcataactaaatcatctgctggtggaagaatctttggggggaaaact
gccgaactggggcaaattccctggcagctcctagtgaaagaacctcagcgaggaggtgca
tctctgattaatgaccgctgggccatcactgctgctcatgtggtggaaaagcagagatca
ctgaagttctttggaggaatggtggatggtctagacaagaataaggttgaattgggaacg
gagacgatcataattcaccccggctatgattatacaaaaagtcattatgataataatatc
gccttgatcaagatgtcttctcgagtccctctcagtgaaaatatcatgcccgtgtgtctt
ccagaaagaaaaagtagtggaccagtgatggagggaaggcaggggaccatctcaggcttt
ggtgcgacatcagacaggagggaaaagagtcgatatttgcaatatggtcatgttaaagaa
tacttaggtcactgttttaattctaatcttaaggtcactaaaaacatgttctgtgctgga
gacactgatggacaagtggacagctgtaaaggagacgccggaggttcactcgtcattcca
atgctggggtttgggtcttctgacacaccataccgcctcaaggggattgtgtcatggggt
ccaccagtgtgtggagataaaaattataaaggttattacaccaaagtggagaattacctg
gactggatcagagaaacgatggagaaaaattaa
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