Clarias gariepinus (North African catfish): 128543008
Help
Entry
128543008 CDS
T10780
Symbol
ext2
Name
(RefSeq) exostosin-2
KO
K02367
glucuronyl/N-acetylglucosaminyl transferase EXT2 [EC:
2.4.1.224
2.4.1.225
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgar01100
Metabolic pathways
Module
cgar_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128543008 (ext2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128543008 (ext2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
128543008 (ext2)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
128543008 (ext2)
Glycosyltransferases [BR:
cgar01003
]
Glycan extension
O-Glycan
128543008 (ext2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
128543008
NCBI-ProteinID:
XP_053369257
LinkDB
All DBs
Position
15:30122978..30166091
Genome browser
AA seq
719 aa
AA seq
DB search
MCASVKYSSRGPALIPRMKTKHRIYYITLFSVVLLGLIATGMFQFWPHSIESSVEWTLDR
RSVHDAPLVKLPASSPIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLQRFVDEVGV
PISSTGLSREYNELLSAISDSDFYTDDVTRACLFIPSIDVLNQNSLRIRETAQALAMLPR
WDKGMNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVYSPLSAE
VELPERQPGPRRYFILSSQTAVHREYRAELERLKEENGESILLLDKCTNLSQGVASARKR
CSKGQTYDYPQILQESSFCVVLRGARLGQAALSDVLQAGCVPVIMADSYILPFSEVLDWK
RASVVIPEEKLPEMYTILKSIPHRQVEEMQRQARWFWDAYFSSMKAVGLTTLQIINDRIY
PYAARTYEQWNNPPVVKWSSVNSPLFLPLIPPRSPGFTAVVLTYDRVESLFRVITEISKV
PSLAKLLVVWNNQNKSPPEESLWPKIVVPLKVVRTKENKLSNRFFPFDEIETEAVLAIDD
DIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMGKWKYESEWTNEVSMVLTGAAF
YHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLVANITGKAPIKVTPRKKFKCPECTA
IDGLSLDQTHMVERSECINKFASVFGTMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgtcagtaaagtacagctctcgcggtccggctctcatcccccgcatgaagacc
aaacaccggatctactacatcacactgttctcggtggtgctgctcggcctcatcgccaca
gggatgttccagttctggccgcattccatcgagtcctcggtggagtggaccctggaccgc
cgtagcgtgcacgacgctccgctggtcaaactgcccgcgtccagccccatccctgagaga
ggagacctgagctgccgcatgcacacctgcttcgatgtctaccgctgcggctacaatccc
aaaaaccgcatcaaggtgtatatctaccccctgcagaggtttgtggacgaggtgggcgtg
cccatcagcagtaccggtctgtcccgtgaatataacgagctgctgagcgccatctccgac
agcgacttctacaccgacgatgtcacccgcgcctgtctcttcatcccctccatcgacgtg
ctgaaccagaactcgctgcgcatccgggagaccgcacaggctctcgccatgctgcccaga
tgggataaggggatgaatcacttattgttcaacatgttaccaggaggacctccggactac
aacacggcactggacgttcccagagacagagctttactcgccggaggaggtttctcgaca
tggacgtacagacaaggctacgacgttagcatccccgtgtacagccccctgtcagctgaa
gttgagctccccgagagacagcctggcccgaggcgatacttcatcctgtcgtctcagacg
gccgtccatcgggagtatcgcgcagagctggagaggctgaaggaggagaacggagagtca
atcctcctgctggacaagtgcacgaacctgtctcagggcgtggcctcagcccggaaacgc
tgctccaagggccagacctacgactacccccagatccttcaggagtcttcgttctgcgtg
gtcttgcgcggcgctcgactcggccaggccgccctcagcgacgtcctgcaggcgggttgc
gttcccgtcatcatggccgactcgtacatcctgcccttctctgaggtgctggactggaaa
agagcttcagtcgtcattcctgaagagaagctcccggagatgtatacgattttgaaaagt
attcctcacagacaggtggaggagatgcaaagacaggctcgctggttctgggacgcatac
ttcagctctatgaaggccgtcggattgaccacgttgcagatcatcaacgatcgcatttac
ccctacgcagcgcgcacgtacgagcagtggaacaacccgccggtcgtgaagtggtcgagc
gtgaacagtccgcttttcctcccgctgattcctcctcggtctccgggattcaccgccgtg
gttctgacctacgatcgggtcgaaagcctcttcagagtcatcacggagatctccaaggtc
ccaagtctggccaagctgctggtggtgtggaacaaccagaacaagagcccgcctgaagaa
tctctttggcccaaaatcgtcgttcctcttaaagtggtgcgcaccaaagaaaacaaactc
agcaatcgcttctttcccttcgacgagatcgagacggaggcggtgctggccatcgatgat
gacatcatcatgctgacctccgacgagctgcagtttggatatgaggtgtggcgggaattc
ccagacagactggtgggatatccgggtcggctccatttatgggaccatgagatgggaaag
tggaagtacgagtcggagtggaccaacgaggtgtcgatggtgttgaccggagctgcgttt
tatcacaagtactttaattatctgtacacgtacaagatgcctggagacattaagaactgg
gtagacgctcatatgaactgtgaggacatcgccatgaacttcctggtggccaacatcact
gggaaagcaccgataaaggtgacgccgcgtaagaagtttaagtgccccgaatgcacggcg
atagacgggctgtcgttggaccagacgcacatggtggagaggtctgagtgcatcaacaaa
tttgcgtccgtgttcggcaccatgccgttgaaagtcgtggaacaccgcgcagatccagtt
ttatacaaggacgacttcccggagaagctcaagagttttcccaatatcggaagtttatga
DBGET
integrated database retrieval system
