Carassius gibelio (silver crucian carp): 128030585
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Entry
128030585 CDS
T08819
Name
(RefSeq) complement C1r-A subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128030585
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
128030585
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128030585
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
128030585
Peptidases and inhibitors [BR:
cgib01002
]
Serine peptidases
Family S1: chymotrypsin family
128030585
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Opsonins
128030585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
cEGF
CUB_2
CDCP1_CUB_6
Trypsin_2
EGF_3
EGF
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
128030585
NCBI-ProteinID:
XP_052474291
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All DBs
Position
A16:10417725..10423191
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AA seq
685 aa
AA seq
DB search
MDGIHLIICLLWACVNMCECEPAMFGEVSSPQYPQPYPPNFQQQWDLEVPQGYQIQLTFN
HLDIESSPDCYYDSVSVVSDNKVLGKFCGQNSTDRLHPGDKPILAPRNRLQLVFLTDDSN
HELHLGFTAFYQAVDIDECSSSSAENALCSQICLNTLGSYLCACHHGYMLRPDQRTCVLE
CGGGVRSESEGTISSPGFPDMTPPDLDCSYTISVQPGYTITLNFSQNFHIEQVYNQGQTC
LFHWLQVSVPGKKPEKYCGGKSPGVLKTGAHFVQLEYHTDRYGQSQGWSLHYTTQRVQCP
HPGIIGNGTVTPNFAQYLYRDYIHVRCMPGYKLMMGEKEIPSFKSICQSNGKWHLTLPEC
KIIDCGAPKLLLNGDFQFISGENNEYLSVIEYRCNEPYYRFKDTAKVTYRCAVDRKWTEV
NNNDIIPPCYPECGMNTEVSFGGRVFGGKQAIPGQIPWQLLHKKHTRGGASLISDYWALT
AAHVVDGLENTTMIWLGGITKAQNQNPVIMEAEKIIIHPYYHRVSLQGHQTNYDNDIALI
KMSARVPLGPNIRPVCLPNKTQESVMEGTMGTVSGFGGFEEGLTSEILRYGDIREYPSEQ
CVFGKMPVTDNMFCAGDDIEHIDSCQGDSGGPLFFPRLGHGTKEKPYEVRGIVSWGPVRC
GEVSKAYYTKVQNYLGWIEETMANN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatacatctaataatttgcctgctgtgggcatgtgtgaatatgtgtgagtgt
gagccagccatgtttggggaggtgtcttctccacagtatcctcaaccatatccaccaaat
ttccagcagcaatgggacctggaggtgccgcagggctaccagatccagttaacgttcaat
cacctggacattgagtcctctccagactgttattatgattcagtctcggttgtatctgat
aataaggttctagggaagttttgtggccagaattccacagacaggttacacccgggtgac
aagcccatcttggctcctcgtaaccgtctgcagctggtttttctaacagatgactcaaat
cacgagttacacttgggattcaccgctttctatcaggctgttgacatagatgagtgttcc
tcttccagtgcggagaacgcactatgttcacagatatgcctcaacacccttggctcatac
ctgtgtgcctgtcaccatggttacatgttacggcctgaccagcgcacctgtgtcttggaa
tgtggaggtggggtgcgcagtgaatcagaggggaccatctcgagtcctgggttcccagac
atgacccctcctgatctggactgcagctacaccatctctgttcagccaggctacacgatc
actctcaacttcagccagaacttccacatagagcaggtctacaatcaaggacagacatgt
ctcttccattggttgcaagtgtctgtcccaggaaaaaagcctgaaaagtactgtggcgga
aaaagccccggagtcctgaaaacaggcgctcactttgtccagctggagtatcacactgac
agatacggacagagccaagggtggagcttacattacaccacacagagggtacagtgtcca
catccaggcattattggcaatgggacagtcacaccaaattttgcccagtatttgtacaga
gactacattcatgtgcgctgtatgccaggatacaagctaatgatgggagagaaagagatt
ccaagttttaagtccatatgccagagtaatggaaaatggcatttgacactaccagagtgc
aagattattgactgtggagctccgaagctgctgttaaatggagactttcagtttatcagt
ggagaaaacaatgaatatctttcggtcatagagtatcgctgcaatgagccatactacaga
tttaaggatactgccaaagtaacatacaggtgtgcagttgacagaaaatggacagaagtc
aacaacaatgatattattccaccttgttatcctgagtgtggaatgaacacagaagtcagt
tttggaggcagagtttttggtgggaagcaagcaataccaggacagattccctggcagctt
ctccataagaaacataccagaggtggtgcatctctgatcagtgattactgggctcttaca
gctgctcatgtggtagatggacttgaaaacaccaccatgatttggcttggtggaataact
aaagctcagaaccaaaacccagtcattatggaggcagagaagattataattcacccatat
tatcacagggtttctttacaggggcatcaaacaaactatgataatgacattgcactcatc
aaaatgtctgctagagtgcctctcggtccaaacatcaggccagtgtgtctcccaaacaaa
acacaagaatctgtaatggaggggacaatgggaacagtatcaggctttggggggtttgag
gagggcttaacaagtgaaattttacgttatggggatattcgggaatatccttctgaacag
tgtgttttcgggaaaatgcctgtcactgataatatgttctgtgctggagatgatattgaa
catattgacagttgtcaaggtgacagtgggggtcctctgttcttccccaggttgggtcat
ggaactaaagagaagccctacgaggtgaggggcattgtgtcatggggtcctgtaagatgt
ggtgaagtttctaaagcttactatactaaagtgcagaactacctgggctggatcgaagaa
acaatggcaaataattaa
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