Cottoperca gobio: 115020800
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Entry
115020800 CDS
T07513
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04622
RIG-I-like receptor signaling pathway
cgob04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115020800 (adar)
04623 Cytosolic DNA-sensing pathway
115020800 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115020800 (adar)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
115020800 (adar)
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115020800 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
TrmB
Motif
Other DBs
NCBI-GeneID:
115020800
NCBI-ProteinID:
XP_029306624
Ensembl:
ENSCGOG00000007148
UniProt:
A0A6J2R970
LinkDB
All DBs
Position
16:complement(10352403..10365110)
Genome browser
AA seq
1390 aa
AA seq
DB search
MSRGRGGPYKEHYHRQPDFQAKDTYYRPGLASLHPSGGPLQSPYSSFYNSPARPVVPIQP
PPAPSLFPSASPIPKHNKVTTKPEAPSSSHNRNHSPNPGPNSFQYQQAEFLRGHRSEAPQ
FSASSRGGGGGVAPDRWPSSSYQPQSGYNRYSYPNSSSPRVRGGYSQDQRFVYPGAPQGT
PGHRRPNQTQLHGPNHNQHSWRAQTDSVCDNFHSLSLHRDSPNRGGERFGRHSESGRSAN
FTKVNITLTSDIQDQIHRALAALPLSDGISAKLLGKQLRLPKKIVNKALYSLERSQKASK
QGLLPPEWSLYREPVRGEEYQNSKVQSPHSHLFFSAGHPPEPEPEPEPEVEVELKTETAE
NWRRGKAEDSDTESSYSCCSSSESTVSEHSQSPAQGQHQEKQHPCATNLPDKDLALPIMA
EQKDRVLQYLLTSREATALLISKNLGLRSAKQVNPTLYSLEKQGEVIKNSEVTPPTWDLS
TRRRERMERSRKATMSLRAEGDRMGEEPGRVEEGGGSVFLLTPPLPPMPGIEPLPLPGGW
MPEKSHSDGHGIKSQASLQTPFLTSSKDEETNEGQWATDDIPEFLNAIRRETDAGKLLAE
HANSVGTVAVSLAAPPPQNLWAKLQEVRLKNPVSGLMEYAQYLGQSCEFQLLDRSGPSHD
PRFRMQVMLNGRLFPIAEASSKKVAKKDAAAATLRILIAEMKGGSSTGDDGNTASVDQVM
DVLPDTSAPAEGTGGGFGTPSVEGMGTVEGPRQLLSRSLPGGKNPVSVLMEYSQRSGNPI
EFIITGQAGQPHDPRFMYKVKVGENMFAEASAPSKKAARQLAAEEAVKELMADGRLQLNK
PQLPLGSSSDGTGAGTTCPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGLLEYARARG
FAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRVLIGEAERA
ARTGELIPAELPVSGSTLHDQIAMLSHQRFNALTTRIQHSLLGRKILATIVMRRGEGLGT
VVSLGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFVRFLYIELLKHHEGTDDSIFEEVD
KNLVRIKSDITFHLYISTAPCGDGALFDKSCSESGDDVEAHQPLFENAKQGKLRTKVENG
EGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHPIYLKSITL
GYLYSHGHLTRAVCCRLARDGEEFNESLTSPFMLNHPEVGRVSVYDSTRHTGKTKESSVN
WSFPDQQSVEVLDGTKGKLDGNKLSVSRVSKSNLFCMFRSLCQRCGRADLLNLPSYSQAK
MSAMSFQQAKQQFFRALSGHGYGAWIGKPLEEKSFESGEGKRNNGASLPVGYGSSRNGGA
AAMEFKQDKA
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggccttacaaagaacactaccacaggcaacctgacttccag
gccaaggacacttattacagacctggacttgcctcccttcatcctagtggtggcccactg
caaagcccatactcaagtttttacaacagccctgcccgtcccgtagtgcccatacagccg
cccccagctccttctctcttcccctctgcttcccccataccaaagcacaataaagtgact
actaaaccagaggctcctagcagttcacataatcggaatcacagccccaatccgggtccc
aattcctttcagtaccaacaggcagagttcctgagaggacataggtctgaggcaccacag
ttcagtgccagttcacgtggaggaggagggggagtcgcacctgacaggtggcctagttct
tcataccagccccaatcaggttacaatagatattcataccccaacagcagcagcccaagg
gttagaggggggtatagtcaagatcagaggtttgtatacccaggagctccgcaaggcacc
ccaggccatcgacgcccgaatcaaacccagttacacggtccgaaccacaaccaacactca
tggcgcgctcaaacagactctgtgtgtgataattttcacagtttgtcccttcatcgagac
agtcccaacagaggaggagaaaggtttggcagacattctgaatcaggcagatcagcaaat
tttactaaagttaacatcactttgacttctgacatccaggaccagattcacagggctttg
gctgctttgccgctaagtgacggtatctctgcaaaattgttaggcaaacaactgcgtctg
cccaaaaagatagtgaacaaggctctctattctttggagcgctcacagaaagcctccaag
caaggactcctccctcccgagtggagtctttacagagaacctgtcagaggtgaggaatat
caaaactctaaagtacaaagtccacattcccatctgtttttcagcgcaggacatcctcca
gaacctgaacctgaacctgaacctgaagttgaggttgagctaaaaacagaaacagcagaa
aactggagacgaggcaaagcagaggactctgacacagaatccagttattcttgctgctcc
tcttcagagtcaactgtctctgaacactctcagtcaccagcacaaggtcagcaccaggag
aaacaacatccctgcgctaccaacttgcctgataaggatctggctcttcccataatggca
gaacagaaagatcgagttctgcagtacctcctaacttcaagggaggcaactgctcttctc
atatccaaaaatctgggactgaggagcgccaagcaggtcaatcccaccctctactcgctg
gagaagcaaggtgaagtcattaagaatagtgaagttacccctcccacctgggatctctca
acccgccgcagagagaggatggaaaggagccgtaaagccacaatgagcctacgcgctgag
ggggatcggatgggggaggaacccggtagagttgaggagggaggagggtctgtctttctg
ctgacgcctccactaccaccaatgccaggcatcgagccgctgccactccctgggggttgg
atgccagagaaaagtcatagtgatggtcatggtattaagtctcaagcctccctccagacc
cccttccttacctcatctaaagacgaagagacgaacgaaggacagtgggccaccgacgac
atcccagaattcctcaacgccattcgcagagagacggacgctgggaaactattagccgag
catgccaactctgtgggaactgtagctgtgtcgctggctgctccacctccacagaacctg
tgggccaaattacaggaggtgaggctgaagaaccctgtcagcggcctcatggagtatgcc
cagtatctgggccagagctgtgagttccagctcctcgaccggtcgggaccctctcacgac
ccaagattccgtatgcaggtgatgctcaatgggaggctgtttcccatcgcagaagcgtcc
agtaagaaggttgcaaaaaaggacgccgctgcggccacactgcgcattctcatcgcagag
atgaagggagggtcgagcacgggggacgatggaaacactgccagtgtggaccaagtgatg
gatgtactcccagacaccagtgcgccagctgaaggcacaggggggggttttgggactcca
agtgtggaagggatggggacagtggagggacctcgtcagctgctgtcccgctctctgcct
ggtgggaaaaatccagtgtctgtcctgatggagtacagccagcgcagcgggaaccccatc
gaattcatcatcactggccaggcaggccaaccacatgacccaaggttcatgtacaaggtg
aaggtcggagagaacatgtttgcagaggcctcagctccaagcaagaaggcggcccgccag
ctggcagcagaggaggccgtcaaagagttaatggctgacgggagattgcagctcaacaag
cctcagttgcccctgggctcttccagtgatggcactggtgcggggactacatgtccctct
ttgccccctctgactgcagacgagttgcgagcagcccacgaggcaggagttggggacctc
attaaccacctgaacaacaacgcagtgtcgggtcttctggagtacgctagagcccggggc
tttgctgctgagatccgactggtgggccagtctgggccaccacatgagcctaagttcacc
taccaggccaagctgggtggacgctggttccccccagtgtgtgcgtctaacaagaagcag
ggaaaacaggaagcagcagatgctgctctacgggttctgattggagaggctgagagggca
gcccgcacaggggagctaatcccagctgagcttccagtgagtggcagcactttgcatgac
cagatagcaatgttgagtcaccagcgtttcaacgccctgaccacacgtatccagcacagc
cttctgggacgcaagattctggccaccatcgtcatgaggaggggggagggcctggggact
gttgtcagcctgggaactggaaatcgctgtgttaaaggggaggaactgagccttaaaggg
gacactgttaatgattgccacgctgaaatcatctccagaaggggatttgttcggtttctg
tacattgagctgctcaaacaccatgaaggcacggacgacagtatatttgaggaagtggac
aaaaacctagtgcgaatcaaatctgacatcacatttcacctctacatcagcacggcacct
tgtggggatggtgctctgtttgacaagtcgtgcagcgagtcgggggatgacgtcgaggcc
catcagcctctctttgagaatgctaagcagggcaagctccgcaccaaagtggagaacggc
gagggcaccatcccagtggagtcgagtgacattgtccccacctgggatggcatccagcac
ggcgagaggctgcgaaccatgagttgcagcgataagatcctacgctggaacgtgttgggc
ctgcagggggcgctgctcacccatttcctgcatcccatctacctgaagtccatcacgctt
ggctatctgtacagccacgggcacctcacacgcgctgtttgctgtcggctggccagagac
ggtgaagagttcaacgaaagtctcacgtctcccttcatgctaaatcacccagaggtcggc
cgggtgagtgtgtacgactccacgcggcacacaggcaagaccaaggagtcgagtgtgaac
tggagctttccagaccagcaaagtgtagaggtgctggacgggacaaaaggcaaactggat
gggaacaaactgagcgtgtccagagtctctaagtccaacctgttctgtatgttccgctct
ctgtgccagcggtgcggccgcgctgacctcctcaacctgccctcctactcccaggccaag
atgtcggccatgtccttccagcaagccaagcagcagttcttccgagctctcagtggccac
ggttacggcgcctggatcggcaagccgctggaagagaagagctttgagtccggggaggga
aaaaggaacaatggagcaagtcttcctgtggggtacggcagcagtagaaacggaggagca
gcagcaatggagttcaagcaagacaaggcatag
DBGET
integrated database retrieval system
