Clupea harengus (Atlantic herring): 105889045 Help Entry 105889045         CDS       T09045                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism char  Clupea harengus (Atlantic herring) Pathway char04010   MAPK signaling pathway char04120   Ubiquitin mediated proteolysis char04140   Autophagy - animal char04144   Endocytosis char04620   Toll-like receptor signaling pathway char04621   NOD-like receptor signaling pathway char04622   RIG-I-like receptor signaling pathway char05132   Salmonella infection char05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105889045 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     105889045 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     105889045 (traf6)    04140 Autophagy - animal     105889045 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     105889045 (traf6)    04621 NOD-like receptor signaling pathway     105889045 (traf6)    04622 RIG-I-like receptor signaling pathway     105889045 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     105889045 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     105889045 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:char04131]     105889045 (traf6)    04121 Ubiquitin system [BR:char04121]     105889045 (traf6) Enzymes [BR:char01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105889045 (traf6) Membrane trafficking [BR:char04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     105889045 (traf6) Ubiquitin system [BR:char04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     105889045 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 U-box zf-RING_5 DM zf-TRAF_2 TRAF3_RING RING_XB3-XBAT31 zf_UBZ zf-RING_11 Sina_ZnF Motif Other DBs NCBI-GeneID:  105889045 NCBI-ProteinID:  XP_031425532 Ensembl:  ENSCHAG00000027515 UniProt:  A0A6P8FI15 LinkDB All DBs Position 6:complement(28994685..29001481) Genome browser AA seq 534 aa AA seqDB search MACCESADSSKGSLESDCHAEFPNSCAAAMEKEYLSPTETSTPSLQVDIQGYDVEFDPPL ESKYECPICLMALRCAVQTPCGHRFCRNCIEKSIRDTGQKCPVDNERLVEEQLFPDNFAK REILSLTVRCPNNGCRDKMELRHLDNHVAECKFSTVPCPQCQESVRKSQLEEHTQEQCLR RTVTCPDCLQPYVFEESKVHEMICPFANVVCQFCNLELIRDQLESHRNTDCLKAPVDCTF SFFGCGEKMQRNDLAQHMLEFTGMHMRYMAEYLRRQSLNGCTSSGLESSPEQRGAARGGD PCQCAQELKNMSETVKFLEGRLVLQDQQLRELTIHNDTQTGQLAEMRRKLGSVEGTVREL ESQQCQGIYVWRVEGFSAHLRSQEAGQAVVLHSPGFYTGRPGYKLCLRLHLQTPSAPRCA NYISLFVHTMQGEFDSQLSWPFQGTIRLAILDQAEGQHHVEVMDTKPDLQAFQRPTTHKN SKGFGYVTFLHLTMLQQRQFVRDDTMLVRCEAMPRFDPYPRREGVQPRGPEPSL NT seq 1605 nt NT seq  +upstreamnt  +downstreamnt atggcgtgctgtgagagtgcagacagttcaaagggcagcctggagtctgactgtcatgct gagttccctaactcttgcgctgcagccatggagaaagaatacttgagtcccaccgagacc tctacccccagcctgcaggtggacatccagggctatgatgtggagtttgatccaccattg gagagcaagtatgagtgccccatctgccttatggctttgaggtgtgctgtgcagacgcct tgcggacatcgcttctgtcgcaactgcatagagaagtccatcagggatacaggacagaag tgtccagtagacaatgaaaggctggtggaggagcagctcttccctgataacttcgccaag cgagagatactgtcccttactgtccgttgtcccaacaatggctgccgagataaaatggag cttcgccatttggataaccatgtggctgaatgcaagttttccacagtgccctgtccacag tgtcaagaatccgtgcggaagagccagctggaggagcacacccaggagcagtgcctccgt cgcactgtcacctgtcctgactgtcttcagccttatgtctttgaggagagcaaggttcat gagatgatttgtcccttcgccaatgttgtgtgtcagttttgcaatcttgagctcattcgt gaccagttggaatcgcatcgtaatacggactgcctcaaagcccctgtagactgcaccttc agcttctttggatgtggagagaagatgcagaggaatgatctggcccagcacatgctggag tttaccggaatgcacatgcgctacatggccgagtatctgcgccggcaaagcctgaacggg tgcacctcctcagggctggagtcctccccagaacagagaggcgccgcccggggaggggat ccgtgccagtgtgcacaggagctgaagaacatgagcgagacggtgaagttcctggagggc cgcctggtgctgcaggaccagcagctgcgcgagctgaccatccacaacgacacgcagacg ggccagctggccgagatgcggcgcaagctgggctccgtggaggggacggtgcgcgagctg gagtcccagcagtgccagggcatctacgtgtggcgggtggagggtttctccgcccacctg cgtagccaggaggccgggcaagccgtcgttctccacagccccggcttctatacgggccgg ccggggtacaagctgtgcctcaggctgcacctgcagacgcccagcgcgccccgctgcgcc aattacatctccctgttcgtgcacaccatgcagggggagtttgatagccagctgtcgtgg cccttccagggcaccatccgcctggccattctggaccaagcggaagggcagcaccacgtg gaggtgatggataccaaaccggaccttcaggcattccagcggcccaccactcacaagaac tctaagggcttcggctacgtcaccttcctgcacttgaccatgctgcagcagaggcagttt gtgcgcgatgacaccatgctggtgcgctgtgaggccatgcctcgcttcgacccctaccca cgtcgagagggcgttcagcctcgaggacctgagccttctctgtga

DBGET integrated database retrieval system