Clupea harengus (Atlantic herring): 105889493
Help
Entry
105889493 CDS
T09045
Symbol
ogdhb
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial isoform X2
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00020
Citrate cycle (TCA cycle)
char00785
Lipoic acid metabolism
char01100
Metabolic pathways
char01200
Carbon metabolism
char01210
2-Oxocarboxylic acid metabolism
Module
char_M00009
Citrate cycle (TCA cycle, Krebs cycle)
char_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
105889493 (ogdhb)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
105889493 (ogdhb)
Enzymes [BR:
char01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
105889493 (ogdhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
R2K_2
Motif
Other DBs
NCBI-GeneID:
105889493
NCBI-ProteinID:
XP_012670800
Ensembl:
ENSCHAG00000011095
UniProt:
A0A6P3VGC4
LinkDB
All DBs
Position
12:complement(10535195..10566829)
Genome browser
AA seq
1024 aa
AA seq
DB search
MHRLRTCAARLRPLTASQTVQSASQTRPAAAGAPRTFQHIRCYTAPVAAEPFLNGTSSNY
VEEMYFAWLENPKSVHKSWNIFFRNANAGAPPGTAYQSPPPLGASLSGLSQAQALMGAQP
NVEKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGIMDADLDSCVPTDIITSSDKLGFYGLD
ESDLDKVFRLPTTTFIGGSESALPLREIIRRLEMAYCQHIGVEFMFINDLDQCQWIRQKF
EKPGVMQFSLEEKRTLLARMVRSTRFEEFLQRKWSSEKRFGLEGSESLIPAMKTIIDKSS
EAGVESVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRI
NRVTERDITLSLMANPSHLEAVDPVVQGKTKAEQFYCGDTEGNRVMSLLLHGDAAFAGQG
IVYETFHLSDLPSYTTHGTIHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNAD
DPEAVMYVCNVAAEWRATFHKDVVVDLVSYRRNGHNEMDEPMFTQPLMYKQIKKQKPVLQ
KYAEKLIAEGVVTRQEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQ
PKSMSCPSTGLTEEELSHIGKVASSVPVEDFTIHGGLTRVLKGRATMVQNRTVDWALGEY
MAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQHVDKKICIPMNHVAPNQAPYTVCNS
SLSEYGVLGFELGFAMASPNALILWEAQFGDFNNTAQCIIDQFISPGQAKWVRQNGIVLL
LPHGMEGMGPEHSSARPERFLQMCNDDPDVFPTIPEDFAVHQLYDANWIVVNCSTPANFF
HVLRRQILLPFRKPLIVFTPKSLLRLPEARSSFDDMISGTHFQRIILDQGPVSQNPSGVK
RVVFCTGKVYYELVRERKNRGMEDSVAIIRIEQLSPFPFDLVKAETDKYAQADLVWCQEE
HKNQGYYDYVKPRIRTTIARSRPVWYAGRGPAAAPATGNKKAHLLELERFLDTAFTLDAF
DGHS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcttaaggacttgcgctgcgcgcttgcggccactcacggcctcacagactgtg
caaagcgcctctcagacgcggccagcggcggcgggggcccctaggacgtttcagcacatc
aggtgctacacagcgcccgtcgctgctgagcccttcctcaacgggacaagttcgaactat
gttgaggagatgtactttgcctggctggagaaccccaagagtgtccataagtcttggaat
atatttttccggaatgctaacgcaggtgcgcccccgggaactgcataccagagcccccct
ccgctgggtgcgagcctgtcgggactctctcaggcgcaggccctgatgggggcccagccc
aacgtggagaagctggtggaggaccacctggctgtccagtccctcattagagcataccag
attcgtgggcatcatgttgcccagttggacccccttgggattatggacgccgatctcgat
tcgtgcgtccccaccgatattatcacatcgtcggacaagcttgggttctacggcctggac
gagtcggacctggacaaggtgttccggttgcccactaccaccttcatagggggcagtgag
agtgcgctacccctaagggagatcatccgccgcctggagatggcatactgccagcacatt
ggcgtggagttcatgttcatcaacgacctggaccagtgccagtggatacggcagaagttt
gagaagccgggagtcatgcagttcagcctggaggagaagagaaccctgctggcccgcatg
gtgcgctccaccaggtttgaggagttccttcagaggaagtggtcatcagagaagcgtttc
ggtctagaggggtccgaatccctcatccccgccatgaagaccatcatcgacaagtccagc
gaggccggcgtggagagcgtcatcatgggcatgccccacaggggtcgtctcaatgtgctg
gccaatgtgatcaggaaggagctggagcagatcttctgccagttcgactccaagctggag
gctgctgatgagggctctggagatgtgaagtaccacctgggcatgtaccaccggcgcatc
aaccgtgtgacggaacgcgacatcaccctctccctcatggccaacccgtctcacctggag
gccgtcgacccggtggtgcagggcaagaccaaggccgagcagttctactgcggagacacc
gagggcaaccgggtgatgtcccttctgcttcacggagacgctgcatttgcaggtcagggc
atcgtctacgagaccttccacctgagcgacctgccctcatacaccacacacggcaccata
cacgtggtggtcaacaaccagattggcttcaccactgacccccgtatggcgcgctcctcc
ccctacccaactgacgtagcacgggtggtgaacgcccccattttccacgtgaacgcggac
gaccctgaggcagtcatgtacgtgtgcaacgtggccgcagagtggagggccaccttccac
aaggacgtcgtcgtagacctggtgagctaccggcgtaacgggcacaatgagatggacgag
cccatgttcacccaacccctgatgtacaagcagatcaagaagcagaagcccgtgctgcag
aaatacgctgagaaactcatcgcagagggagtcgtcaccaggcaggagtacgaggaggag
attgccaagtatgataagatctgtgaggaggcccatgctcgctccaaagacgagaagatc
ctccacatcaagcactggctggactccccctggcccggttttttcaccctggacggccag
cctaagagtatgagctgcccctccaccggtctgactgaggaggaactctcccacatcggc
aaagtcgcttcctctgttcctgtagaggacttcaccatccacggaggtctcacccgtgtc
ctgaagggccgtgctacgatggtgcagaatcggacagtggactgggccctgggggagtac
atggccttcggctccctgctcaaggagggcatccacgtcagactcagcggacaggacgtg
gagagaggcaccttcagccaccggcatcatgttcttcatgaccagcatgtggacaagaag
atctgcattcccatgaaccacgtggcccccaaccaggccccctacaccgtctgcaacagc
tcactctctgagtacggcgtgctgggctttgagctgggttttgccatggccagccctaac
gctctgatcctgtgggaggcccagtttggggatttcaacaacacggcgcagtgcatcatc
gaccagttcatcagcccgggccaggccaagtgggtccggcagaacggcatcgtgctcctg
ctcccccatggcatggagggcatgggtcctgagcactcttctgcccggccagagaggttc
ctgcagatgtgcaacgatgaccccgacgtcttccctaccatccctgaggactttgctgtg
caccagctctatgacgccaactggattgtggtgaactgctccactccagccaacttcttc
catgtgctgcgccgccagatcctgctgcccttccgcaagcctctcattgttttcacccct
aaatctctcctgcgcctcccagaggccaggtccagctttgatgacatgatctcaggtaca
cacttccagcggatcatcctagaccagggtcccgtatcccagaatccctcgggagtgaag
cgtgtcgtcttctgcacagggaaggtatattacgagcttgtacgtgagcgcaagaaccgt
ggcatggaggactctgttgccatcattcgcatagagcagctctctccgttcccctttgac
ctggtgaaggccgagactgataagtacgctcaggcagacctggtctggtgtcaggaggag
cacaagaaccagggttactatgactacgtcaagccccggatccgtaccaccatcgcccgc
tcccgccctgtctggtatgcgggccgcgggcctgctgcagccccagcgaccggtaacaaa
aaagcccacctgctggagctggagcgcttcctggacaccgccttcaccctcgacgccttt
gatgggcattcctag
DBGET
integrated database retrieval system
