KEGG   Clupea harengus (Atlantic herring): 105889860
Entry
105889860         CDS       T09045                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04145  Phagosome
char04514  Cell adhesion molecules
char04672  Intestinal immune network for IgA production
char05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    105889860
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105889860
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    105889860
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    105889860
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105889860
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105889860
  Exosomal proteins of epithelial cells
   105889860
  Exosomal proteins of breast milk
   105889860
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 DUF2627
Other DBs
NCBI-GeneID: 105889860
NCBI-ProteinID: XP_031426012
UniProt: A0A6P8FSA2
LinkDB
Position
7:2743918..2746018
AA seq 255 aa
MSSLQYFVSGVIFVSTLLGVGGFNGYYSSNIYHCHFNPNNLSDVEFILSLWFNKAEFLQF
NSTVGKFVGYTELGVHNAEKCNKDKGILAQWQAQRDSYCKHNVQNDFNNILTKKVEPEVR
LTMGRPSTGGHPAMLVCSAYDFYPKMIRVTWHRDGKEVTTGDVISSEELADGDWYYQTHS
HLEFTPKAGEKISCVVEHASLTEPKEFVWDPSMPEPERNKIAIGAAALVLGLIVTAAGFI
YYKTKSRGRILVPSG
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtcctctttacaatactttgtttctggggtgatttttgtctctacacttttaggagtg
ggtggttttaatggctattacagcagtaatatttaccactgccatttcaacccaaataat
ttgagtgatgtggagttcattttatccctctggtttaacaaggctgaattcctacagttc
aacagcactgtggggaagtttgtgggatacactgagcttggagtgcataatgcagagaaa
tgtaacaaagacaaagggattctggcacaatggcaggcccagagggacagttactgcaaa
cacaatgtccagaatgacttcaataacatactgacaaagaaagttgagccagaggtgaga
ctgactatggggaggccatccactggtggtcatcctgccatgctggtgtgcagcgcgtat
gacttctacccaaagatgatccgcgtgacctggcacagagatggcaaggaagtgaccacg
ggtgatgtgatatctagcgaggagctggcggatggagactggtactaccagacccactcc
cacctggagttcacccccaaagctggagagaagatctcctgtgtggtggagcacgccagc
ttgacggagcccaaggagtttgtctgggacccctccatgcctgagcctgagaggaataag
attgccattggagctgcagcactggtgctggggttaatcgtcactgctgctgggttcatc
tactacaagacaaagtccagagggcggatcttggtacccagtggttaa

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