Clupea harengus (Atlantic herring): 105890792
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Entry
105890792 CDS
T09045
Symbol
ints1
Name
(RefSeq) integrator complex subunit 1 isoform X3
KO
K13138
integrator complex subunit 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105890792 (ints1)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
105890792 (ints1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Flavi_NS2A
Motif
Other DBs
NCBI-GeneID:
105890792
NCBI-ProteinID:
XP_012672325
Ensembl:
ENSCHAG00000000167
UniProt:
A0A6P3VID5
LinkDB
All DBs
Position
1:8879672..8907126
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AA seq
2197 aa
AA seq
DB search
MNRPKPTALRRPSAAKPSGHPPPGDFIALGSKSQASEPKAPALLKPTSAGLPSDRKRETS
SSLPSSGLSSLAKRPKLSSTPPVSALGRLADVAAVDKRAISPSIKEPSVVPIEVPPAVLL
DEIEAAEAEGNDDRIEGLLCGAVKQLKLNRAKPDITLYLSLMFLAKIKPNVFATEGVIEA
LCSLLRRDTSINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDS
SHCKVFVDNIQTAFSTKMPPKSMLLQADAGRSGGDLSAGNSPHPSTPDEDDSQAELLIAE
EKLSPDDDGQSMPRYEELAESVEEYVLDVLRDQLNRRQPMDNVSRNLLRLLTATCGYKEV
RLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNSNSHCADDMEVISNLIKIRLKPKVLLNHY
MLCVREMLNAHRDNLGTMVKLVIFNELSNARNPNNMQLLHTLLLHSPEQAPKFLAMVFQD
LLINKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEPNYVDMEFKERFVIQVTD
LLTVSMMLGITAQVKEAGVAWDKGEKKNLEQLRTFQNNIAAIQRDAVWWLHTVIPTISKL
GAKDYVHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGLSR
DLPLGPADAMELADHLVKRAAGVQSEACLSSLSVADLGVLKVERIQLIDAVLNLCTYHHP
ENITLPAGYQAPNLAISTLYWKAWLLLLVVAAFNPQKIGLAAWDGYPSLKMLMEMVMTNN
YSYPPCTVADEETKTEMINRELQMAQRERQEILAFESHLAAASTKQTITEANSLLLSQLT
SLDPQGPPRRPPPLVLEQVKTLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLADL
VQSSEGSLDVLPVQCLCEFLLHDAADDETPMEDDEEGESKEQRAKKRQRLQKQRQLLLRL
QDLLLGPKADEQTTCEVMDYFMRRLSSPQVASRVLAMKGLSLVLTEGEPKDGEERDQPME
EDPEDAELLPAYQWLLQDLPKLPLFNSVRAMTASALQQAIHMETDPQTISAYLIYLSQHA
PVEEQSLHNDLALDVGRLIVERSTIMNCLFSKHSCRPESEAVLTALTCIFSAYTRRMRKT
KEGEDLYSWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKGESDFYNLLDIWFP
DKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVARLVDAALQDLESQQLLLFVQSFGIPV
SSMSKLLQYLDQAVSHDPASLEQNIMDKNYMAHLVEVQHERGATGGHTFHSLLSASLPAR
SDAAEVSKAKVTVETPHGSVKMRTATQLPVISPEDDLTNILLQLFPLKVDPRWPSPTPRP
LSLALQQALAQELVRARKGHAPQQGGGTAGRLLQALAALLNSAPAGALVMAMHRSHNLSC
PLLRQLHLHQRLVSQDVAFSSLFFNAVVQMLRWLDNPGVEGGPLKTLLKSLAAQYSHKHH
IADVRAGFLHLAEVLSLRRDSEVAAKGLIASLRAGERCNAEPELIGKVLKGLMEIRSPYL
EELLSLLMTVGTAGPVAMVNSLLLQEIDEQSVKIEADTKTPELSRAGASAGLLVDWLEKL
DPEVISACPELQQKLLFALNKAKGSQVSLTPSYRPYLLALLTHQSNWSTLHKCISALLNK
HRDQRLDPSSALDFLWACGQIPRIWQGRDQKTPQKRTEKFVLRLKPEELISLVDLILSES
ELDCRDASSTKTALDQASCTLIQSRLPLLHSCCHGDMESVKKVAEYLINCARKWGDSVMS
KRCQSLLLQIYLHFPEIIQRVNLPGAVLRSEGAADGSTCKLDVLVHRLISLLGDTGDSKS
AESRASDANLACRRLAVSHPVLLLRHLPMVAALMHGRAHLNLQELRKSNHLTFFNDVLAI
LELLQPLVFHSHHQGALQDCLLSIINVLQNFKRTSRQQPTAFITKFVLFIQKYLAHDAAA
AVAYLQKHSDILQGLSLENPDLVQLKSLLAGLTLPVRSGSSESPSEDRDAEDASTGSLPL
FSIAASIPLTAADMTKYLKKMSRGEAVEDVLQVLTEVDEKSKRSPEIIQHFTNDLQRLMS
SPEELCRNMAFSLALRCVQNTPSLSAEFLPTFMYCMGSGNFDVVQTAIRNLPEYVLLCQE
HADILLHKAFLVGMYGQIDTSSIISESMKVLHMESTT
NT seq
6594 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggccgaaacctactgccctcaggcgccctagcgccgcaaaaccctcaggccat
cctccacctggagactttattgccctcggttcaaaaagtcaagccagtgagcccaaagca
cctgcccttctgaaaccaacatcagcaggcttaccatctgatcgcaagagagaaacctcc
tcctctcttccatcctctggtctctccagcttggctaagcgcccaaagctctcctccaca
cctcccgtaagtgcactaggacgcctggctgatgttgcagcagtcgataagagggctatt
tcaccgtcaatcaaggagccatctgttgtgcccattgaagtccctcctgctgtgcttctg
gatgagattgaggctgcagaggcggagggaaatgacgaccgcattgaggggttgctctgt
ggcgctgtcaaacagctcaagctgaatcgggccaaaccggacatcacgctctacctcagc
ctgatgttcctggccaaaatcaagcccaatgtctttgccactgaaggcgtgattgaggcg
ttatgtagcctgctgagacgagacacttccataaatttcaaagccaaagggaacagtctg
gtgtccgtgctggcctgcaacctgctgatggcagcttatgaagaggatgaaaactggcca
gagatctttgtcaaagtgtacatcgaagattcactgggagagcgtatatgggtggacagc
tcccactgcaaggtttttgtggacaacatccagactgccttcagcaccaagatgcctccc
aagagcatgttgctgcaggcggacgcaggccggtcaggaggtgacctcagtgcaggtaac
agcccacacccctccaccccagacgaagatgacagtcaggctgagctgctgattgcagag
gagaaactcagcccagatgatgatggacagtcgatgcccaggtatgaggagctcgctgag
agcgtggaggagtatgtgctggacgtcttgcgagatcagctgaaccgccggcagccgatg
gacaacgtgtccaggaacctgctgcggctgctgaccgccacctgcggatacaaggaggtg
cggttgatggccgtgcagaggctggagatgtggctgcagaacccaaagttgacgcgccca
gctcaggatctgctcatgtctttgtgcatgaacagcaactcgcattgtgctgacgacatg
gaggtgatctccaacctcatcaagatccgcctcaagcccaaagtgctcctcaaccactac
atgctgtgtgtcagggagatgctgaacgcacaccgagataatttaggcaccatggtaaag
ctggtaatcttcaacgagttatccaatgcccgcaaccccaacaacatgcagctgctgcac
actctactcctgcacagtcctgagcaggcgccaaagttcctggccatggtgttccaggac
ctgctgatcaataaggatgactacctgcgagcctcgcgggctctgctgagggagatcatc
aagcagaccaaacacgagatcaacttccagtccttctgccttggcctcatgcaggagagg
aaagagcccaactacgtggacatggagtttaaagagcgttttgtcattcaagtgactgac
ctgctgaccgtctccatgatgctgggcattacagcacaagtcaaggaggctggcgttgcc
tgggacaaaggagagaagaagaatctggagcagctgaggactttccagaacaatattgct
gccatccagagggatgcagtgtggtggctccacaccgtcattcccaccatcagcaaactg
ggagccaaggactatgtacactgccttcacaaagtccttttcacagagcagcctgagacg
tattacaagtgggacaattggcccccagagagcgatagaaatttcttcctgcgcctgtgc
tccgaggtgcctttgttggaggacaccctgatgcgtatcctggtgatcggtctgtcacgt
gaccttcccctgggcccggccgacgccatggagctggccgaccacctggtgaagcgggcc
gccggcgtgcagtcggaggcctgcctgtcttctctgtctgtggcggacctgggtgtgttg
aaagtggagaggattcagctgatcgacgccgtgctgaacttgtgcacttatcaccacccg
gagaacattacgctgcctgccggctatcaggccccaaatctggcgatttcaaccctttac
tggaaggcctggctgctgttactggtggtggctgcgtttaatccccagaagataggtctg
gcagcctgggatggatatccctctctcaaaatgctcatggagatggtcatgactaataac
tactcctaccctccatgtacggtggctgacgaggagactaagacagagatgatcaaccgc
gagctgcagatggctcagcgtgagaggcaggagatcctggccttcgagagtcacctggcc
gccgcctccaccaagcagaccatcactgaggccaacagcctgctgctgtctcagctcacc
agcctcgacccacagggtccccctcgccggcccccacccctcgtcctggagcaggtgaag
actctgaaccagtctctgcgcctgggccacctgctgtgccgcagccgcaacccagacttc
ctgctcaacatcatccagagacaggcatcctcccagtccatgccctggctagcagacttg
gtccagtccagtgaggggtccttggatgtgttgcccgtgcagtgcctgtgtgaatttctg
cttcacgatgcagctgatgacgagactcccatggaagatgacgaagagggagagagcaag
gagcaaagggccaagaagagacagaggctgcagaagcaacggcagctcctcctgcgtctg
caggacctgctgctgggccccaaggccgacgagcagaccacgtgtgaggtgatggactac
ttcatgcgccgcctcagctccccgcaggtggcctccagggtcctggccatgaagggcttg
tctctggtgttgacagaaggtgagccgaaggatggcgaggagcgggaccagcccatggag
gaggacccggaggacgcagagctgctcccggcctaccagtggctgctgcaggacctgccc
aaactccccctgttcaacagcgtgagggccatgacggccagcgcactgcagcaggccatt
cacatggaaacagatcctcagaccattagtgcctatctgatctacctatcccagcatgca
ccagtggaggagcagagtctgcacaatgacctggcactggatgtgggcagactgatagtg
gagcgctccaccatcatgaactgcctcttctcgaagcactcgtgccgcccggagtcggag
gctgtgctcacagcgctcacctgcatcttctccgcctacacccgcaggatgaggaagacc
aaggaaggggaggacctctacagctggtctgaatcccaggatcaagtgtttctgcgatgg
accactggagagacggccaccatgcacattctcgtggttcacgccatggtcatactgctc
accctggggccacccaaaggagagagtgatttttacaatctgctggacatttggttccct
gacaagaagcccctccccaccgccttcctagtggacacctcagaggaagctctcctttta
ccggattggttaaagctgaggatgatccggtcagaggtcgcccgattggttgatgcagct
ctgcaggacctggagtcgcagcagctgctgctgtttgtgcagtccttcggcatccccgtg
tccagcatgagcaagctgctgcagtacctggaccaggccgtgtcccacgaccccgcgtct
ctggagcagaacatcatggacaagaactacatggcccatctggtggaggtgcaacatgag
cgtggcgccaccggggggcacacctttcactccttgctcagcgcatccctcccagcccgc
agtgatgctgcagaggtgagcaaggctaaggttaccgtggagacaccccatgggtcagtg
aagatgaggactgccactcagctgccagtcatcagccctgaggatgacctcaccaacatt
ctgctgcagctgttccctctgaaggtggacccccgctggccctcccccacccccaggccc
ctctctctggccctgcagcaggccctggcccaggagctggtccgcgccaggaagggccac
gccccgcagcagggtggcggcacagccgggcgtctgctccaggccctggcggcgctgctg
aactcggcccccgccggcgccctggtgatggccatgcaccgcagccacaacctctcctgc
cctctgctgcgccagctccacctccaccagcggttggtgtctcaggacgtggccttctcc
tctctttttttcaatgccgtggtccagatgctccggtggttggacaaccccggtgtggag
gggggtcctctgaagacgctcctcaagtcattggcagcgcagtactcccataagcaccac
atcgctgatgtgcgcgcaggttttctgcacctggcggaggtgctgtctctgcgtcgggac
tcggaggtggccgccaagggcctcatcgccagcctcagggccggggagaggtgcaacgct
gagcccgagctcatagggaaagtgttgaagggcctgatggagatcagatccccttacctg
gaggagctgctgtccctgctcatgacagtcggcacggcaggcccagtcgctatggtgaac
tctctgctgctccaggagattgacgagcagagtgtgaagatcgaggccgacaccaaaact
ccggagctgagtagagctggggcgagtgcaggcctgctggtggactggctggagaagctg
gacccagaagtcatctctgcatgcccagagcttcaacagaaacttctgtttgcattaaac
aaggctaaaggttctcaggtcagcctgaccccgtcctacaggccgtacctcctcgcgctg
ctcacgcaccagtctaactggagcaccctgcacaagtgcatcagcgccctgctcaacaag
cacagagaccagaggctggaccccagctcggccttggacttcctgtgggcctgtggtcag
attcctcgcatctggcagggcagagaccaaaagacgccacagaagcggacagagaagttt
gtcctgcgcctgaaaccagaggagctcatcagcctggttgacctgatcctgtcggagtcg
gagcttgactgccgcgatgcatccagtaccaagacggccttggaccaggcttcctgcaca
ctcatccaatcgcggctgccgctgctccacagctgttgccacggcgacatggagagcgtg
aagaaagtggctgagtacctgattaactgcgccaggaagtggggggacagtgtgatgagc
aagcgatgccagagtctcctcctgcagatctacctgcacttccccgagatcatccagcgc
gtgaatctgcccggggccgtgctgagaagcgaaggggcagcagatggcagcacctgcaag
ctggatgtgctggtgcatcgtttgatatctctgctgggggacactggtgactccaagtct
gcagagagccgggcatcagatgccaacctggcctgcaggaggctggcagtgtcacaccca
gtgctgctgctcaggcacctgcccatggtggctgctctgatgcacggccgcgcacacctg
aacctgcaggagctgcggaagtcgaaccacctgacgttcttcaacgatgtgctggccatc
ctggagctgctgcagccgctggtcttccacagccaccaccagggggcactgcaggactgc
ctgctctccatcatcaatgtcctccagaactttaagaggacatctcgccaacagccaaca
gctttcatcaccaagtttgtgctgttcatccagaagtaccttgcccacgacgctgcagcc
gctgtggcttatctacagaagcattccgacattctacagggtctctccttagagaaccca
gacctggtccagttgaagtctctgctggccggcctgacactgcctgtgaggagcggctca
tctgagagcccatccgaggacagagacgcagaggacgcatcgacaggatccctccctctg
ttcagcatcgcggcgtccataccgctgaccgccgcagacatgactaagtacctgaagaag
atgtccagaggagaggctgtggaagacgtgctccaggttctgaccgaagtggatgagaaa
tcgaagaggagcccggaaataatccagcacttcaccaatgatcttcagaggctgatgagc
tcacctgaggagctgtgtcgaaatatggctttcagcttggctctacgctgcgtccagaac
acccccagcctgtctgcagagtttctccccaccttcatgtactgcatggggagtggaaac
tttgacgtcgtgcagaccgctatcaggaatttaccggaatacgtgctgctctgtcaagaa
catgctgatatattgctccacaaagcgttcctggttgggatgtatggacagattgataca
agctccattatctctgaatcaatgaaggtcctccatatggaatccacaacataa
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integrated database retrieval system
