Clupea harengus (Atlantic herring): 105890812
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Entry
105890812 CDS
T09045
Symbol
rasa1b
Name
(RefSeq) ras GTPase-activating protein 1
KO
K04352
Ras GTPase-activating protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105890812 (rasa1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2
RasGAP
PH
C2
SH3_1
SH2_2
PH_11
SH3_9
SOS1_NGEF_PH
DUF7360
DUF7656
Motif
Other DBs
NCBI-GeneID:
105890812
NCBI-ProteinID:
XP_031433640
Ensembl:
ENSCHAG00000020424
UniProt:
A0A6P8GFA6
LinkDB
All DBs
Position
12:complement(3805243..3818469)
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AA seq
1028 aa
AA seq
DB search
MMATEDCGEETDPASLVTQIDGAGVLDTARFAFCPKPRMRMPETGPTLAMDTNRTLGSPE
VSHRMSLDWSLGVESKPGTVSQINKDGNRVAEFPSEGIGGQILPNTASPDGSAALPLVPP
PRTCGILGTVDEGDGLDCQEYEEEEVVFSLTAPPLNQWYHGKLDRTMAEERLQQARNPGS
YLIRESDRRPGSFVLSFLSMTNVVNHFRIIAMCGDYYIGGRRFSSLSDLIGYYSYVSCLL
KGENLLYPVAPPEPVEHRRRVRAILPYTKVPETPEISFLKGDMFIVHNELEDGWMWVTNV
RTDEQGLIVEDLVEEVAKEEDPHEGKVWYHGKINKQEAYNLLMNVGQVCSFLVRPSDSTP
GDYSLFFRTNESIQRFKICPTPSNQFMMGGRYYSSIDAIIDHYKREQIVEGYYLREPVSV
QHQQHLLSDIMDGKEIYNTIRRKTKDAFYKNIVKKGYLLFNKGKGKQRWKNLYFILEGND
SQLIYFESEKRATKPKGLIDLSVCSVYNVHDSMFGRPNCFQLVDQHFSEEQYIFYFAGET
PEQAQDWMKCLQTFCNNLKKPAQPSSNKRLRQVSSLLLNVEEAHKLPSKHFNNAYCNICL
NSVQVAKTHPREGLNPVWTEEFLFDDLSSDINRFEISLSNKTKKSKENDILFMVCQLCHL
QRGKMIDEWFHLSSHVALKTGTETGSLRVRARYSMEKIMPEEEYNNFKELILLKEFHLIN
ALAHVCGQDRTLLASILLRIFRHEKMEAPLLRALNDKEISLEDEASTLFRATTLASTLMD
QYMKATATAFVHHALKNTILKIMDCKQSCELNPSKMEKNDDVNVNLTHLLSLVSELVEKI
FMAAEILPPTLRFIYGCLQKSVQQKWPLNVTMRTRVVSGFVFLRLICPAIVNPRIFNIIT
DPPSPTASRTLTLVAKAVQSLANLVEFGTKEPYMEGVNLFIKSNKDRMIMFLDELGNVPE
LPDTTEHFTTDLPRDLAALHQLCVSHSDELRTLSNERGVQQHILKKLLAITELLQQRQDH
YAPSNSSR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacagaggactgtggcgaggagacggaccctgcttcgctggtgacacagata
gatggcgcaggagtattggacacagcccgatttgcgttttgtccaaagccgaggatgcgg
atgccggagacgggcccgaccttagctatggacactaaccgcaccttggggtcaccagaa
gtgtcccatcggatgtcgttagactggtcacttggggtggaatcgaaaccgggaacagta
tcacagattaataaagatgggaacagggtggcagagttcccatcggagggaattggtggt
cagatattacccaacaccgcaagtccggatgggagcgctgcccttcccctggtgccaccg
ccccgcacttgtgggatattgggaacggtggatgaaggcgatggactggactgccaggaa
tacgaagaagaggaagttgtcttctccctcaccgcccctccacttaatcagtggtatcat
gggaaactggatcggaccatggctgaggagcggttgcagcaggccaggaaccctggcagc
tatctcatcagggagagcgaccggcggcctggctcctttgtgctctccttcctcagcatg
accaatgtggtgaaccacttcaggattattgccatgtgtggagactattatataggaggc
agacggttctcctccctgtccgacctgattggctattacagctacgtttcctgtttgctt
aaaggagagaacctcttatatccagtggcgcctccagagccagtggagcatcgcagaaga
gtgcgagcaatattgccatacaccaaagtgcctgaaactccagaaatcagtttcctgaaa
ggggacatgtttatcgttcacaatgaactggaagacggttggatgtgggtgactaatgtc
cgcacagatgagcaggggctgattgtggaagatctagtggaggaagtggcaaaagaagag
gatccacatgaaggaaaagtttggtatcacggcaagatcaacaagcaagaagcctacaac
ctacttatgaatgttgggcaggtgtgcagctttttagtgcggccttcagacagcacccca
ggggactattctctcttcttccgaaccaatgagagcattcagcgcttcaagatctgcccc
acgcccagcaaccagtttatgatgggtggaagatattacagcagtattgacgcaatcatt
gaccactacaaaagggagcaaattgtggagggctactacctgagagagcctgtgtctgtc
cagcaccaacagcatttgctctctgatatcatggatggcaaagagatctacaacacgatc
cgcagaaagacaaaagatgccttctacaagaacattgtgaagaaaggatatctcctcttc
aacaaaggcaaaggaaagcagcggtggaagaacctctacttcatcctggaggggaacgac
tcccagctcatctactttgagagtgagaagcgtgccactaagcccaaagggctgattgac
ctcagcgtgtgctccgtttataatgtccatgacagtatgtttggcaggccaaactgtttc
cagttggtggaccagcactttagtgaagagcagtacatcttctactttgcaggagagact
ccagagcaagcacaggactggatgaagtgtttgcaaaccttctgcaacaacctcaaaaaa
cctgctcagccctcctctaacaaacgcctacgtcaggtcagcagcttgctcctgaacgtt
gaggaggctcataaattacccagcaagcatttcaacaacgcttactgcaacatttgcctg
aacagcgtccaggtggccaagacccatcctcgagagggcctgaaccctgtgtggactgag
gagtttctctttgatgacctctcaagtgacatcaacagatttgagatcagtttgagcaac
aagaccaagaagagcaaggagaatgatatcttgttcatggtctgccagctgtgccatctg
cagcggggtaagatgattgatgagtggttccacctgagctcgcacgtggctctgaagacg
ggcacggagaccggctcgctcagggtccgcgcccgctactccatggagaagatcatgccc
gaggaagagtacaataacttcaaagagctgattctgttgaaagagttccatttgatcaac
gcactggcccacgtgtgtgggcaggaccgcacgctcctggccagcatcctgctgcgcatc
ttcagacacgagaagatggaggctcctctactccgggcgctcaatgacaaggagatcagc
ttggaagatgaagcctccacactgtttcgtgccacaacactggcgagcacacttatggat
caatatatgaaggccacggccactgcatttgtgcaccatgcactcaaaaacaccatccta
aagattatggactgcaaacagtcctgtgagctaaatccctcaaagatggagaagaatgat
gatgttaatgtgaatttgacccacctcttgagtcttgtgtctgaattggtggagaagatt
tttatggctgctgagattcttcctccgaccctgaggttcatttatgggtgtttacaaaaa
tctgttcaacagaaatggccactgaatgtcacaatgagaacaagagttgtgagtgggttt
gtcttcctgaggctgatctgtcctgctattgtcaaccctagaatatttaacataatcact
gatcctccctcacctactgcctcacggaccctcactctggtagccaaagctgtgcagagc
ctggccaatctggtcgagtttggaaccaaggagccatatatggagggtgtgaaccttttc
atcaagagcaacaaggacagaatgattatgtttctggatgagcttgggaatgttcctgag
ctacctgacactacagagcactttacgacagacttgccgcgggacctggctgcactgcat
cagctgtgtgtcagccactccgacgagctgcgcaccctcagcaacgaacgtggagtccaa
cagcacatcttgaaaaagcttctggcaatcactgagcttcttcaacaaagacaagatcac
tacgcaccttccaacagcagcagatag
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