Clupea harengus (Atlantic herring): 105890814
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Entry
105890814 CDS
T09045
Symbol
hacd1
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00062
Fatty acid elongation
char01040
Biosynthesis of unsaturated fatty acids
char01100
Metabolic pathways
char01212
Fatty acid metabolism
Module
char_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
105890814 (hacd1)
01040 Biosynthesis of unsaturated fatty acids
105890814 (hacd1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
char01004
]
105890814 (hacd1)
Enzymes [BR:
char01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
105890814 (hacd1)
Lipid biosynthesis proteins [BR:
char01004
]
Fatty acid synthase
Component type
105890814 (hacd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
105890814
NCBI-ProteinID:
XP_031439853
UniProt:
A0A6P8GLS2
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Position
17:34398..57183
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AA seq
242 aa
AA seq
DB search
MASGEEESSVEEKENNNKRRTKSAIATAWLTFYNIAMTAGWLVLAVAMARFYLQRGTHKG
LYKSISRTLKFFQTFALLEVGHCAIGMIRTSVIVTGVQVCSRIFMVWFVTSSIKQVQNEE
SVVLFLGAWTLTEIFRYSYYTFNLLHHLPYFIKWARYNLFIVLYPLGVIGELMTIYAALP
YVRKSAMFSMRLPNKYNVSFDYYIFLILVMLSYIPLFPQLFLHMLRQRRRVLHGEVIVEK
DD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcgaggaggaaagttcggtggaggagaaggaaaacaacaacaaaaggaga
acaaaaagcgccatcgcgacagcatggctgacattctacaacatcgccatgacggccggg
tggctggtgctagctgtggccatggcccggttctatctgcagaggggaacccataaaggc
ttgtataaaagcatatctagaaccctcaagttcttccagacatttgccttactggaggtt
gggcactgtgcaatcggaatgatccggacgtcggtgattgtgacaggggtccaggtttgc
tccaggatattcatggtctggtttgtcaccagcagcataaaacaggttcagaatgaggag
agtgtggtgttgttcctgggggcgtggacgctgacggagatcttccgatactcgtactac
accttcaacctgctccaccatctgccctacttcatcaaatgggccaggtataacctgttc
atcgtgttgtaccctctgggtgtgattggtgaactgatgaccatctacgctgcgctgccg
tacgtgcgcaagtcggccatgttctcaatgcgccttcccaacaaatacaacgtgtccttc
gactattacatcttcctcatcctcgtcatgctgtcctacatccccttgtttccacagctg
ttcctccacatgttacgccagaggagacgagtccttcatggtgaggtcatcgtggagaag
gatgactag
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