Clupea harengus (Atlantic herring): 105891217
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Entry
105891217 CDS
T09045
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
105891217 (lgi1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
LRR_14
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
105891217
NCBI-ProteinID:
XP_012672835
Ensembl:
ENSCHAG00000017567
UniProt:
A0A6P3VJF1
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All DBs
Position
23:14211574..14217503
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AA seq
545 aa
AA seq
DB search
MGYTNKTVRGCAVLLWIGTLLLLAEGRKPKQPRCPASCTCTKDNALCENIRSVPHSFPPD
VVSLSFVKSGFTEIAGGSFLHTPALQLLLFTANSFDSIDEDAFLGLPHLEYLFIENNKID
SISPYAFRGLKSLTHLSLAYNNLESLPKDVFKGMDALTKVDLRGNLFHCDCKLKWLVEWM
YSTNATVDQIFCAGPPLYQGKKINDLVPQSFDCITAEFAAHPPLKFESISVEAFTFGNDQ
YVVFAQPFTGTCTFLEWDHVEMAFRIYDSIESTSTVVCKPLVIDDQLFIVVAQLFGGSHI
YKRDVSANKFIKIQDIDILKIRKPNDIETFRIDGESFFVIADSSKAGSTTVYKWNGNGFY
SHQSLHPWYRDTDVEYLDIASKPHLILSSSSQRPVIYQWNKGLKQFDRRTDIPEMEDVYA
VKHFHVKGDLYICLTRFIGDSKVMRWDGNMFVELQTMPSRGSMVFQPVVIGSWQYAILGS
DYSLTQVYQWDSKKGQFVHFQELNIQAPRAFALVSIDNKEFLLASSFKGRSQIYEHLIID
MSNKR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggatacacaaacaaaaccgtgagaggatgcgctgttctgctgtggatcggtactcta
ttgcttttggcggagggcaggaaaccgaagcaaccccgatgccctgcatcttgcacatgc
accaaagataatgccttatgtgagaacatacgatcggttccccacagtttcccacctgac
gtagtgtcactatcttttgtgaaatctggattcactgagattgcaggggggagcttcctc
cacacgcctgctctgcagctcctcttgttcacagccaactcgtttgactccattgatgaa
gatgcattcctgggattgccccacctagaatacttgtttattgaaaacaacaaaattgat
tcaatatcaccttatgcattccgtggtctgaagtcgctaacacacctgagccttgcctac
aataaccttgaatcactgcccaaagatgtgttcaagggaatggacgccttaacaaaagtg
gacctgagaggaaacctgtttcactgtgactgcaagcttaagtggctggtggaatggatg
tacagcacgaatgccacagtggatcagatcttttgcgccgggccccccctctaccaaggg
aaaaagatcaatgacctcgtgccccagtcatttgactgcatcacagcagagtttgccgcc
cacccgccacttaaatttgaatccatctccgtggaggccttcacgtttggaaatgatcaa
tatgttgtgtttgctcaacccttcactggaacatgcaccttcctggaatgggatcacgtg
gagatggcgttcagaatatatgacagcattgagagcacatccactgttgtgtgcaaaccc
ttggtcatcgacgaccagcttttcatcgttgtggcccagctatttggcggctcccacatc
tacaagcgcgacgtctcagccaacaagttcatcaagatccaggacatcgacatcctgaag
atacgcaagcccaatgacatcgagaccttccgcattgacggtgagtcctttttcgtgatc
gccgacagctccaaggccggctccaccaccgtctacaagtggaacggcaacggcttctac
tcccaccagtccctccacccgtggtaccgtgacactgacgtggagtacttggacatcgcc
agcaagcctcacctgattctctccagcagctcccagcggcccgttatctaccagtggaac
aagggcctaaagcagtttgaccgtcgcactgacatccccgagatggaagacgtgtacgcc
gtcaagcacttccacgtcaaaggcgatctctacatctgtctgacacgcttcatcggcgac
tccaaggtcatgcgctgggatggcaacatgtttgtggagctacagaccatgccctcgcga
ggctccatggtcttccagcctgtagtcattggcagctggcaatatgccatcctgggcagc
gactactccctcacgcaggtctaccagtgggactccaagaagggccagtttgtccacttc
caggaactcaacatccaggcaccccgggcctttgccttggtgtccattgacaacaaggag
ttcctactggcgtccagctttaaagggagaagccagatttatgagcatctaatcatagat
atgagtaacaaacgttaa
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