Clupea harengus (Atlantic herring): 105891472
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Entry
105891472 CDS
T09045
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char00514
Other types of O-glycan biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105891472 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
105891472 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105891472 (plod3)
Enzymes [BR:
char01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
105891472 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
105891472 (plod3)
2.4.1.66 procollagen glucosyltransferase
105891472 (plod3)
Glycosyltransferases [BR:
char01003
]
O-Glycan biosynthesis
O-linked Gal type
105891472 (plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
105891472
NCBI-ProteinID:
XP_031440541
Ensembl:
ENSCHAG00000014570
UniProt:
A0A6P8GRT7
LinkDB
All DBs
Position
18:9159473..9178456
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AA seq
736 aa
AA seq
DB search
MDPSLWAVICALLLGCADYSSAADRKNTMSPENLLVITAATEETDGFKRFMRTAREFNYT
VKVLGLGEEWKGGDVARTVGGGQKVRWLKNELQKHASKEDLIIMFVDSYDVIFASGPKEL
LRKFSQLGHRVVFSAEGFCWPDQRLASKYPPVPSGKRYLNSGGFIGYATDLYNIVKQWKL
KDNDDDQLFYTKIYLDKEQRTKFNMTLDHRSHLIQNLNGALEEVVLKFEKARVRARNVAY
DTLPVIIHGNGPTKLQLNYLGNYVPTAWTYEDGCGICDDDLLYFNDVADEEMPIVHIGVF
IEQATPFLEEFLERLATLNYPHTRLRLFIHNNVVFHERHIEQFWTRHRSLFPSATIVGPE
ENMSQAAARTQAVNACKKDPTCDYYFSIDSEVAVTNPDILRILIEENKPVIAPMLSRHGK
LWSNFWGALSPEGFYSRSEDYIDIVQGKRVGLWNVPYLTQVYLIQGSILRTRFQAVDLYQ
QSGMDPDMAFCRSVRDQGVFMFVSNRDEFGRLVSSTAYNTTRLYPDMWQIFDNPVDWKEK
YIHENYSKIFEGDENVVEEPCPDVYWFPAFSERMCDELVETMEAHGEWSGGKHTDERLTG
GYENVPTVDIHMNQIDYEKEWLKFLKEYISPVTEKLYPGYFPKAQAIMNFVVRYRPDEQP
SLRPHHDSSTFTINVALNSKGKDYQGGGCRFLRYDCKVEAPRKGWSFMHPGRLTHYHEGL
PTTQGTRYIMVSFVDP
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtctctttgggccgtgatttgtgcattactgctgggctgtgccgactactca
tcagctgctgataggaagaataccatgtctccagagaatttgttggtgatcacagctgcc
acagaggagacagatggcttcaaacgcttcatgagaactgccagagagttcaattatact
gtgaaggtgcttggtctgggtgaggagtggaaaggaggtgatgtggcgcgcacagtcggg
ggaggccagaaggttcgctggctgaagaacgaactccaaaaacacgccagcaaggaagac
ttaatcatcatgttcgtggacagttatgatgtgatctttgcgagcgggccaaaggagttg
ttgcggaagttctctcagctgggtcacagagtggtgttctccgccgagggcttctgctgg
cccgaccagcgcctggcctccaaatacccgcctgtgcccagtggcaaacgctacctcaac
tcaggagggttcattggctatgctactgacctctataatattgtgaaacaatggaaatta
aaagacaatgatgatgaccagctgttctataccaagatctaccttgacaaggaacagcgg
acaaagtttaacatgacactggaccatcgctctcacctgattcagaatcttaatggggcc
cttgaggaggtggtgctgaaatttgagaaggctcgtgtgcgtgctcggaacgtggcctat
gacacacttcctgtcatcatccatggcaatgggcccaccaagttgcagctgaattacctt
ggcaactacgtcccgactgcctggacctatgaagatggttgtgggatctgtgatgatgat
ctcctctacttcaatgatgtggcggatgaagaaatgccgatagtccacatcggtgtgttt
atcgagcaggcgactccattcttggaggagttcctcgagcgtctggcaaccctcaactat
ccacacacacggctgcgtctgttcatacacaataacgtggtcttccacgagcgacacatt
gagcagttctggacccgtcaccgttctctgtttccctcggcaaccatcgtcggccctgag
gagaacatgtctcaggctgcggccagaacccaggcagtgaacgcttgtaagaaggacccc
acctgtgactactacttcagcattgactctgaggtggccgtgaccaacccagacatcctg
cgcatcctcatcgaggagaacaagcctgtgattgctcccatgctgtctcgccacgggaag
ctctggtccaacttctggggcgctttgagccctgagggcttctactcgcgctccgaggat
tacatcgacatcgtccagggcaaacgagttggcctgtggaacgtgccttacctgactcag
gtgtacctgatccaaggctccatacttcgcactcgcttccaggcagtcgacctctaccag
cagagtggcatggacccagacatggccttctgccgctctgtccgagaccagggggtgttc
atgtttgtgtcaaacagagatgagtttggccgcctggtttcctccaccgcctacaacacc
accaggctatacccagacatgtggcagatcttcgacaaccctgtggactggaaggagaag
tacatccatgagaattactcaaagatctttgagggagacgagaatgtggtggaagagcca
tgcccggatgtgtactggtttccggcattttctgaacgtatgtgtgacgagctggtggag
accatggaggcccacggtgaatggtccggaggaaagcacacggatgagcgcctgactgga
ggttatgagaacgtgccaacagttgacatccacatgaaccagattgattacgagaaggag
tggctcaagttcctcaaggaatacatttctccagtcactgaaaaactttacccaggctac
ttcccaaaggctcaggcaatcatgaactttgtcgtgcggtaccgcccagatgaacaaccc
tccctcagaccccatcacgactcctccacgttcaccatcaacgtcgccctcaacagcaag
ggcaaggactaccagggtggcggctgccggttcctgcggtatgactgtaaggtcgaggcg
ccacgcaagggctggtccttcatgcaccccggccgtctcacccactaccacgagggtcta
cccaccacacagggcacacgctacatcatggtgtcctttgtagacccctaa
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