Clupea harengus (Atlantic herring): 105891672
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Entry
105891672 CDS
T09045
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04137
Mitophagy - animal
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04217
Necroptosis
char04621
NOD-like receptor signaling pathway
char04622
RIG-I-like receptor signaling pathway
char04920
Adipocytokine signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105891672
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105891672
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105891672
09143 Cell growth and death
04210 Apoptosis
105891672
04217 Necroptosis
105891672
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105891672
04622 RIG-I-like receptor signaling pathway
105891672
09152 Endocrine system
04920 Adipocytokine signaling pathway
105891672
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105891672
09171 Infectious disease: bacterial
05132 Salmonella infection
105891672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105891672
04121 Ubiquitin system [BR:
char04121
]
105891672
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105891672
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105891672
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
105891672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-ACC
zf-RING_6
zf-RING_UBOX
ATG16
MATH
TRAFD1-XIAF1_ZnF
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
105891672
NCBI-ProteinID:
XP_031426817
Ensembl:
ENSCHAG00000002101
UniProt:
A0A6P8FUK0
LinkDB
All DBs
Position
7:complement(26245382..26252585)
Genome browser
AA seq
609 aa
AA seq
DB search
MGKASIIPPHSQKARSHVRAGIMAAQEPSPPSSLEGNKPGFPKKILANKLEDKHLCNICQ
KILRRPFQAQCGHRFCSYCFNKTVSSGPQKCSACIKEEIFEEPTSILKQGCAFPDNAARR
EVEALAAVCPNEGCSWTGSIKEYELTHEGKCDYMIISCPSCKELLRANELERHNERECPE
RTLNCKYCKEPFQFKDIKAHDEICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRAPCRF
HVVGCDMSVCVRVCVPVPFQVEKEKIQEHERACSHEHLNLLLHFIMGVKVNLESLQPQSL
ELASHKIHELHQALQDLEQKMGQLGVGAPVQGACAPLPLPLPPTPTLSTSFTPLPTGVGA
ALELQLHNEKTKVAELGRRCQELELKVSTFENIVCVLNREMERSSATMEAYNRQHRLDQD
KIEILSNKVRQLERTVGLRDLSIVEMEGKMREMSAATYDGVFVWKISDFSKKRADAVAGR
APAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGHSDALLKWPFNQKVTL
MLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLPKLDSKNSYIRDDTIFI
KAIVDLTGL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagcttcaatcattccccctcatagccagaaagccaggtcacatgtccgtgcg
ggaataatggctgcacaggaaccatcaccaccatcttcattagaaggcaacaaacctgga
ttccctaagaaaatactggccaacaagcttgaggacaaacatttgtgtaatatttgtcag
aaaattttaagacggcctttccaagcccaatgtggtcatcgcttttgttcatactgtttt
aacaaaactgtgagttctggaccacagaaatgcagtgcttgtattaaagaggagattttt
gaggaaccaacatccattctgaaacaaggctgtgcatttcctgacaacgcagcgagaaga
gaggtggaggctctagcggcagtgtgtcccaatgaaggctgttcctggacgggcagcatt
aaagaatacgagcttacccacgaaggaaagtgtgactatatgatcatctcatgtccgtcc
tgtaaagaacttctccgggctaacgagctggaacgtcacaatgagcgtgaatgtccagaa
agaacattgaattgcaaatactgcaaagaaccttttcagttcaaagatattaaggctcat
gatgaaatatgtccaaagtacccaatgatatgtgaaggatgtgccaagaaaaaaattccc
agagaaaagtatgtggaccacatcaagctctgtactaaatttagagcaccgtgcagattt
catgtggttggctgcgatatgtcagtgtgtgtgcgtgtatgtgtgcccgtaccttttcag
gtggagaaagagaagatccaggagcacgagcgcgcctgctcccacgagcacctgaacctg
ctgctgcacttcatcatgggcgtcaaggtgaacttggagagtctgcagccccagagcctg
gagctggccagccacaagatccacgagctgcaccaggctctgcaggacctggagcagaag
atgggccagctgggtgtgggggcccccgtgcagggcgcctgtgcacctctccctctccct
ctcccgcccacgcccacgctctccacctccttcaccccgctgcccacgggcgtgggcgcg
gctctggagctccagctgcacaatgagaagaccaaggtggccgagctgggccggcgctgc
caggagctggagctcaaggtgagcacgttcgagaacatcgtgtgcgtgctcaaccgcgag
atggagcgatcctctgccaccatggaggcctacaaccgccagcaccgcctggaccaggac
aagatcgagatactcagcaacaaggtgcgtcagctggagcggacagtgggcctgagggat
ctctccatcgtggagatggagggaaagatgagggagatgtcggccgccacatacgacggc
gtctttgtgtggaagatctccgacttcagtaagaaaagggccgacgccgtggctggaaga
gctcctgcaatgttctccccagccttctacaccagtaaatatggctacaagatgtgctta
cgcatctacctgaacggggatggaacgggacgaggctctcacttgtctttattcttcgtg
gtgatgaggggacacagtgatgccctgctcaagtggcccttcaaccagaaagtgaccctc
atgctcctggaccagaacaaccgcgagcacatcatcgacgccttccgacccgacatctca
tcctcgtctttccagcggcccgtcagcgacatgaacatcgccagcggctgcccgctcttc
tgtccgctccccaagctcgactccaagaactcctacatccgcgacgacaccatcttcatc
aaggccatagtggacctgactggtctgtag
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