Clupea harengus (Atlantic herring): 105891725
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Entry
105891725 CDS
T09045
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18 isoform X2
KO
K10159
toll-like receptor 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04620
Toll-like receptor signaling pathway
char05132
Salmonella infection
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105891725 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105891725 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105891725 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
105891725 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105891725 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105891725 (tlr18)
04054 Pattern recognition receptors [BR:
char04054
]
105891725 (tlr18)
04090 CD molecules [BR:
char04090
]
105891725 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105891725 (tlr18)
Membrane trafficking [BR:
char04131
]
Endocytosis
Phagocytosis
Toll-like receptors
105891725 (tlr18)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of breast milk
105891725 (tlr18)
Pattern recognition receptors [BR:
char04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105891725 (tlr18)
CD molecules [BR:
char04090
]
Proteins
105891725 (tlr18)
Glycosaminoglycan binding proteins [BR:
char00536
]
Hyaluronan
Cell surface receptors
105891725 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_6
LRR_5
ThsB_TIR
LRR_9
Motif
Other DBs
NCBI-GeneID:
105891725
NCBI-ProteinID:
XP_012673360
Ensembl:
ENSCHAG00000006361
UniProt:
A0A6P3VJ82
LinkDB
All DBs
Position
11:5720154..5733235
Genome browser
AA seq
835 aa
AA seq
DB search
MLGFTLTVAAIVTSVLNVHAYISIQQTELKHLCSVSDDQRRADCRGQHLDRVPKENLPVP
LEEVDLSYNSLQRIHSTDFSHLPHLRVLNLEYNNISAIDNDAFTFNSLLEDLNIFNNSLA
VVPNKALTNLTRLRNLEMSNNFFGEVALGDVFSTFSGLQELSVGGPFVRELKKSNLLALK
NISLFKFAFKSGSSLLKYEPGSLECLKTNNMWLDIAMDNIPNVLNAMLNDLASKSFYALR
FRNLFEFLYYTGENDIFQGLRHIRAQQLIFHRGKFNENLLRMALINIQQSPIKALGLFFI
DFARSPTFVDSGAGSSVTNLALDRLVLSDISNPDILRFDWRFTWFNKIRRLSIWNINFNT
VPCDAWLEMGAMEVLDVSNNQLKDHYLINRRCDYAGTMPVLHTFNVSFNQLTRLSDFASF
AGEFKRLQVLDVSHNQLQTVDASECNWKQNISKLIAHHNALVVTSLRCLPTTVLYLDLSF
CNLDQLDTNYFLKAINLRELLLSGNKIKFIPFGWKSPNLQSLSLDGNSFGLISMNSFKDM
PSLSTLRAGNNPYHCICDLHTFIQKTTSDRRVNITDWPGNYKCYYPEHLVNTMMADFFPG
RVACDTRLVILISVITTAFVVFSIVLMCYFFNVPWYTKATFQIIRAKYRANKEGTRPEQD
YDYHAFISYSHSDAEWVRNQLLPCLESSRPPYRVCIHERDFTPGKWIIDNIIENIENSLK
VIVVLSQHFVDSEWCNYELYFAQQRAIGKTFSDVILVVKEPIDPNSLPSKYCKLKKMLST
KTYLEWPQQPKQQVFFWAQLKSVLGRPSPTQHRPDSRHGTPTGSVVSVTELAQLE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctttacgttgactgtggctgccatagtcacctctgtactgaatgtccatgcc
tacatatcaatccagcagactgagctcaagcatctctgctctgtcagtgatgaccaacgc
agggctgactgccgtgggcaacacctggatcgtgtacctaaggaaaatctccctgttcca
cttgaggaagtggatctctcttacaacagccttcagaggatccacagcacagatttctcc
cacctgccacacttaagggtgctaaaccttgagtataacaacatctctgcaatcgacaat
gatgcttttacgtttaacagtcttctggaggacctcaacattttcaacaactctttggcg
gtcgttccaaacaaagcactgacaaatctaactaggcttcgaaaccttgagatgtcaaat
aacttttttggtgaagtggctcttggggatgttttctccaccttcagtggcctccaagaa
ctatctgttggtggaccctttgtcagagaactaaagaagagcaacctcctcgccttaaaa
aacatctcactgtttaagttcgcctttaaaagtggctcaagtctcttgaagtatgagcca
ggctctttagagtgtctaaagactaacaatatgtggcttgacattgccatggacaatata
ccaaatgtgctgaatgcaatgctaaatgatttagcgagtaagtccttctatgctcttcgc
ttccgtaacctgtttgagtttctttactacacaggagaaaatgacatttttcaaggtttg
aggcacatcagagcacaacagttaatttttcatcgtgggaaatttaatgagaacctgcta
aggatggcattaataaacatacagcagagccccattaaggcacttgggctatttttcatt
gactttgcccgctctcccacctttgttgatagtggagcaggatcgagtgtgacaaatcta
gccttagatcgtctggtcctttcggatataagcaacccggacattttacgcttcgactgg
cgtttcacatggttcaacaagatacgcaggctatcgatttggaacatcaacttcaatact
gtgccctgtgatgcttggttggaaatgggtgccatggaggttctagatgtctccaacaac
caactgaaagaccattacctcatcaacaggagatgtgattacgccggcaccatgccagtg
cttcacaccttcaatgtcagcttcaaccaacttactaggctaagtgactttgcatcattc
gcaggggagtttaagaggctccaggttctagatgtcagccacaatcaactccaaacagtt
gatgccagtgagtgcaactggaagcagaatatctccaaactgattgcacatcataatgcc
ttggtggttaccagtttgaggtgtttgcccacaacagtgctttatctggatctctccttc
tgcaacctggatcagcttgatactaactattttctaaaagcaatcaatctaagagaactc
ctactcagtgggaacaaaatcaagttcatcccttttggctggaaaagtcccaatctgcag
tccttgtccctagacgggaattcctttggcctcataagcatgaactctttcaaggacatg
cccagcttatctacactaagagcgggaaataacccatatcactgcatttgtgatctgcac
actttcatccagaagacaacatctgacagaagagtgaacatcactgactggccaggaaat
tacaaatgttattacccagagcacctggtgaacacaatgatggccgacttcttccctggc
cgcgtagcttgtgacaccaggcttgtaattctcatcagtgtcatcactactgcttttgtg
gtctttagcattgtgctaatgtgctacttcttcaatgtgccctggtacaccaaagcaaca
ttccagatcatcagagcgaagtacagagccaacaaggagggaactagaccggagcaggac
tatgattaccatgcattcatttcctacagtcactcggatgctgagtgggtgagaaaccag
ttgttgccatgcctagaaagcagcaggcctccataccgtgtttgtatccatgagagggac
ttcacgccaggaaagtggatcatcgacaacataattgagaacatcgagaacagtctgaag
gttattgttgtcctttcacagcattttgtagacagtgagtggtgtaactatgagctctac
tttgcccagcaacgagccattggtaaaactttcagtgatgtcatccttgttgtgaaagag
cccatcgacccaaactccttgccaagcaagtattgcaaactgaagaaaatgctgagcacc
aagacctatctggaatggcctcagcaaccaaagcaacaggtcttcttctgggcacagctc
aagagtgtgttgggcagacctagtcccacccaacacaggcctgacagcaggcatggcacc
cctactgggagtgtggtgtctgtcactgagttggctcagttagagtag
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