Clupea harengus (Atlantic herring): 105891982
Help
Entry
105891982 CDS
T09045
Symbol
pvrl2l
Name
(RefSeq) PVR cell adhesion molecule related 2 like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03266
Virion - Herpesvirus
char04514
Cell adhesion molecule (CAM) interaction
char04517
IgSF CAM signaling
char04520
Adherens junction
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
105891982 (pvrl2l)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
105891982 (pvrl2l)
04517 IgSF CAM signaling
105891982 (pvrl2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105891982 (pvrl2l)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105891982 (pvrl2l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105891982 (pvrl2l)
04090 CD molecules [BR:
char04090
]
105891982 (pvrl2l)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Nectin family
105891982 (pvrl2l)
CD molecules [BR:
char04090
]
Proteins
105891982 (pvrl2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
ig
I-set
Ig_2
Ig_PVRIG
DUF4342
Mucin15
TM_ErbB1
Syndecan
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
105891982
NCBI-ProteinID:
XP_031442568
Ensembl:
ENSCHAG00000025087
UniProt:
A0A6P8GVN4
LinkDB
All DBs
Position
19:12611090..12710216
Genome browser
AA seq
539 aa
AA seq
DB search
MSKDGASDVYFTARSWAIAAVIVIMLQVSSAQRVRVETEVQAFPTESVQLRCMFLEPGNT
KLTQVSWIYEDEVADRVNIAVFHPQYGESFPDSRFKGRVRFTKGNLDNPSIEISKMEMTD
EGKYTCEYATYPSGNEQGTTNLVMLAKPKNSAAPVIVRAGSTAVIVAHCEAAQGKPAATI
TWESDVAGGKANTTQVPQPDGTVTVRSEYWLAPAKTYNDNNIKCKVTQRTQDRPQDFPMK
LSIQYPPAVTIVGYDENWYIGRTDAVLECQVDANPAPITVDWTSVSGVLPDAVEVAGNQL
RVKKVDDSVNTTFVCEVKNVLGSAKSQLTAVVIESSEDPSNAGVLAGAILGSLLALLLVV
ALVGVLVMRNRRQHQHRSYPADGEGGTYGNKVRLFGMGSNTSGNGGKTSKNSGNNNNGPM
YSYREGEPDQLDEKPNDPHAGCRGDSPTPHHILLSERDEAERRKLEAMDDSQEEYEDEEE
EEQEEANRYDGYGYHNPHQQQPHARPALPHHNDSQIGYLDDDMESQRDGSVISRTAIYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagacggcgcctcagatgtctactttacggcgaggagttgggcgattgcagcc
gtaattgttatcatgcttcaagtgtcgagtgcccagcgtgtgcgggtggagacggaggtg
caggcgttcccaacggagtccgtccagttgcgctgcatgttcctcgaacctggaaacacc
aaactcactcaggtgtcatggatctacgaagacgaagtagcagatcgggtgaacatcgca
gtgttccacccccagtacggcgagagcttccccgactcccgtttcaagggtcgcgtgagg
ttcaccaagggcaacctggacaacccgtccatcgagatcagcaagatggagatgacggac
gagggcaaatacacctgcgagtatgcaacctaccccagtgggaacgaacaaggcaccacc
aacctcgtcatgctggccaaacccaagaactccgctgcgccggtcatagtcagggccggc
tcgacagcggttatcgtcgcccactgtgaggccgcccagggcaaaccggccgccaccatc
acctgggagtcggatgtggcggggggcaaggccaacaccacgcaggtgccgcagcccgac
gggacggtgacggtgaggagcgagtactggctggccccggccaaaacctacaacgacaac
aacatcaagtgcaaggtcacccagcgcacgcaggacaggcctcaagacttccccatgaag
ctctccatacaatatccgccagctgtcaccatcgtaggctatgacgaaaactggtacata
ggtcgcaccgacgccgtcctcgagtgccaggttgacgccaacccggcgcccatcactgtc
gactggacctcggtgagcggggtgttgccagatgcggtggaggtggcgggcaaccagctg
agggtgaagaaggtggacgacagcgtgaacaccacgtttgtgtgcgaggtgaagaacgtc
ctgggatcggccaagagccagctcaccgctgtggtgatcgagtcgagcgaggacccttcc
aatgccggcgttctggcaggtgccatcctgggcagtctgctggccctcctattggtcgtg
gctctggtgggcgtgttggtgatgcgcaaccgtcgccagcatcaacaccgcagctaccct
gccgacggcgaggggggcacctatggcaacaaggtccgcctcttcggcatgggcagcaac
accagtggcaacggcggcaagacgagtaaaaacagcggcaacaacaacaacggtcccatg
tactcataccgcgagggcgagcccgaccaactagacgagaagcccaatgacccgcatgcc
ggctgccgtggtgacagccctacgccacatcacatccttctgagtgagcgtgacgaagct
gagcgccgcaagctagaagccatggacgacagccaggaggagtacgaggatgaggaggag
gaggagcaggaagaggcaaacaggtacgatggctatggctaccacaacccccaccagcag
caaccccacgcccggcccgccctcccccaccacaacgactcccagattggctacctggat
gacgacatggagtctcagcgcgatggctccgtcatctccaggacggccatctacgtctga
DBGET
integrated database retrieval system
