Clupea harengus (Atlantic herring): 105891982
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Entry
105891982 CDS
T09045
Symbol
pvrl2l
Name
(RefSeq) PVR cell adhesion molecule related 2 like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03266
Virion - Herpesvirus
char04514
Cell adhesion molecules
char04520
Adherens junction
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
105891982 (pvrl2l)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105891982 (pvrl2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
105891982 (pvrl2l)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105891982 (pvrl2l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105891982 (pvrl2l)
04090 CD molecules [BR:
char04090
]
105891982 (pvrl2l)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Nectin family
105891982 (pvrl2l)
CD molecules [BR:
char04090
]
Proteins
105891982 (pvrl2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
ig
I-set
Ig_2
DUF4342
Mucin15
TM_ErbB1
Syndecan
MCM3_WHD
Motif
Other DBs
NCBI-GeneID:
105891982
NCBI-ProteinID:
XP_031442568
Ensembl:
ENSCHAG00000025087
UniProt:
A0A6P8GVN4
LinkDB
All DBs
Position
19:12611090..12710216
Genome browser
AA seq
539 aa
AA seq
DB search
MSKDGASDVYFTARSWAIAAVIVIMLQVSSAQRVRVETEVQAFPTESVQLRCMFLEPGNT
KLTQVSWIYEDEVADRVNIAVFHPQYGESFPDSRFKGRVRFTKGNLDNPSIEISKMEMTD
EGKYTCEYATYPSGNEQGTTNLVMLAKPKNSAAPVIVRAGSTAVIVAHCEAAQGKPAATI
TWESDVAGGKANTTQVPQPDGTVTVRSEYWLAPAKTYNDNNIKCKVTQRTQDRPQDFPMK
LSIQYPPAVTIVGYDENWYIGRTDAVLECQVDANPAPITVDWTSVSGVLPDAVEVAGNQL
RVKKVDDSVNTTFVCEVKNVLGSAKSQLTAVVIESSEDPSNAGVLAGAILGSLLALLLVV
ALVGVLVMRNRRQHQHRSYPADGEGGTYGNKVRLFGMGSNTSGNGGKTSKNSGNNNNGPM
YSYREGEPDQLDEKPNDPHAGCRGDSPTPHHILLSERDEAERRKLEAMDDSQEEYEDEEE
EEQEEANRYDGYGYHNPHQQQPHARPALPHHNDSQIGYLDDDMESQRDGSVISRTAIYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagacggcgcctcagatgtctactttacggcgaggagttgggcgattgcagcc
gtaattgttatcatgcttcaagtgtcgagtgcccagcgtgtgcgggtggagacggaggtg
caggcgttcccaacggagtccgtccagttgcgctgcatgttcctcgaacctggaaacacc
aaactcactcaggtgtcatggatctacgaagacgaagtagcagatcgggtgaacatcgca
gtgttccacccccagtacggcgagagcttccccgactcccgtttcaagggtcgcgtgagg
ttcaccaagggcaacctggacaacccgtccatcgagatcagcaagatggagatgacggac
gagggcaaatacacctgcgagtatgcaacctaccccagtgggaacgaacaaggcaccacc
aacctcgtcatgctggccaaacccaagaactccgctgcgccggtcatagtcagggccggc
tcgacagcggttatcgtcgcccactgtgaggccgcccagggcaaaccggccgccaccatc
acctgggagtcggatgtggcggggggcaaggccaacaccacgcaggtgccgcagcccgac
gggacggtgacggtgaggagcgagtactggctggccccggccaaaacctacaacgacaac
aacatcaagtgcaaggtcacccagcgcacgcaggacaggcctcaagacttccccatgaag
ctctccatacaatatccgccagctgtcaccatcgtaggctatgacgaaaactggtacata
ggtcgcaccgacgccgtcctcgagtgccaggttgacgccaacccggcgcccatcactgtc
gactggacctcggtgagcggggtgttgccagatgcggtggaggtggcgggcaaccagctg
agggtgaagaaggtggacgacagcgtgaacaccacgtttgtgtgcgaggtgaagaacgtc
ctgggatcggccaagagccagctcaccgctgtggtgatcgagtcgagcgaggacccttcc
aatgccggcgttctggcaggtgccatcctgggcagtctgctggccctcctattggtcgtg
gctctggtgggcgtgttggtgatgcgcaaccgtcgccagcatcaacaccgcagctaccct
gccgacggcgaggggggcacctatggcaacaaggtccgcctcttcggcatgggcagcaac
accagtggcaacggcggcaagacgagtaaaaacagcggcaacaacaacaacggtcccatg
tactcataccgcgagggcgagcccgaccaactagacgagaagcccaatgacccgcatgcc
ggctgccgtggtgacagccctacgccacatcacatccttctgagtgagcgtgacgaagct
gagcgccgcaagctagaagccatggacgacagccaggaggagtacgaggatgaggaggag
gaggagcaggaagaggcaaacaggtacgatggctatggctaccacaacccccaccagcag
caaccccacgcccggcccgccctcccccaccacaacgactcccagattggctacctggat
gacgacatggagtctcagcgcgatggctccgtcatctccaggacggccatctacgtctga
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