Clupea harengus (Atlantic herring): 105892474
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Entry
105892474 CDS
T09045
Symbol
mdm2
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2 isoform X2
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04068
FoxO signaling pathway
char04110
Cell cycle
char04115
p53 signaling pathway
char04120
Ubiquitin mediated proteolysis
char04144
Endocytosis
char04218
Cellular senescence
char04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105892474 (mdm2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
105892474 (mdm2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105892474 (mdm2)
09143 Cell growth and death
04110 Cell cycle
105892474 (mdm2)
04115 p53 signaling pathway
105892474 (mdm2)
04218 Cellular senescence
105892474 (mdm2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
105892474 (mdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105892474 (mdm2)
04121 Ubiquitin system [BR:
char04121
]
105892474 (mdm2)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105892474 (mdm2)
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
105892474 (mdm2)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
105892474 (mdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
SWIB
Zn_ribbon_RanBP
zf-RING_2
zf-RING_4
DZR
Motif
Other DBs
NCBI-GeneID:
105892474
NCBI-ProteinID:
XP_012674193
Ensembl:
ENSCHAG00000006190
UniProt:
A0A6P3VKW8
LinkDB
All DBs
Position
21:complement(5553327..5561287)
Genome browser
AA seq
473 aa
AA seq
DB search
MADNCLSNGQISSADNEKLVRPKLPLQTLLQQAGAEKDVFTMKEVMFYLGKYIMRKQLYD
QQQQHIVRCGGDELGAVLGVDTFSVKEPRVLFAMITKNLTAVKNPDTTETQSSLLQPGSQ
SEPEGRAEDSESNATTSSRRRRRSSDPAESSTEDETRERRKRHKSDSLSLTFDDSLSWCV
IGGLRGIRRSSESSDSHSNTEVGISVSDDSDESLGEDSDSDNFSVEFEVESIDSDAYSEN
DEASVAGEDEVYEVTIFGAEDEDSFDEDTEITEADYWKCPKCDELNPPLPRNCNRCWTLR
TDWLPENETDNAAATTPADTPAESASDAKPLPPKPTLMDSEEGLDVPDGKRALSGSPPAK
EDPSAVTASLPDSQTSACSQPSTSSAVSGSVSSSQDEVLPELERFNSLDACLPASCLEPC
VICQSRPKNGCIVHGRTGHLMACYTCAKKLKNRNKLCPVCREPIQSVVLTYVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaattgtttaagcaatggccaaatcagttcagctgataacgaaaaattggtt
cgaccaaagctgccattacagacactgctacaacaagcaggtgcagagaaggatgttttc
accatgaaagaggtgatgttttaccttggtaagtacatcatgaggaaacagctctatgac
cagcaacagcagcacatagtccgctgcggaggggacgagctcggagccgtgctgggggtc
gacacattctcagtgaaagagccacgagtcctgtttgcaatgatcacaaaaaacctaact
gcagtgaaaaacccagacacaacagaaactcaatcttccctcttacaacccggcagccag
agtgaaccagaaggacgagcagaggactcggagtcaaatgcaactacctcatcacgcagg
agaaggcgaagcagtgaccctgcggagtcctccacagaggacgaaacgagagaacgaaga
aagcgccacaagtctgacagcctctctctgactttcgacgacagcctgtcatggtgtgtg
attggaggtctccgcggcatcaggaggagcagcgagtcatcggactcccacagtaacact
gaagtaggtatctctgttagcgacgactctgatgagagcctcggtgaagactcagattcc
gataacttcagtgtggagtttgaggtggagtccatcgactcggacgcatacagcgagaat
gacgaggcctcagtggcgggcgaggacgaggtctatgaagtcaccatctttggggctgag
gatgaggactcatttgatgaggacaccgagatcactgaggctgactactggaagtgcccc
aagtgtgatgagctgaacccacccctgccccgcaactgcaatcgctgctggacactgcgc
actgattggctccccgaaaacgaaactgataacgcagccgctaccacgcctgctgacact
cccgccgagtcagcctctgatgccaagccccttcccccaaaacccaccctgatggactcc
gaggagggtctggatgtgcccgatggcaagcgtgctctgtctggctctccccccgccaaa
gaggacccttcggcagtgaccgcatccctgccggactctcagacctcggcctgctcgcag
ccctccacctcctctgcggtgagcggtagcgtgtcctccagccaggatgaagttctgcca
gagctggagcgctttaacagcctggatgcctgtctgcccgccagctgcctggagccctgt
gtcatctgccagagccgccccaagaatggatgcatcgtgcacggccgcaccggccacctc
atggcctgctacacctgcgccaagaagctcaagaaccgcaacaagctgtgcccggtgtgt
cgggagcctatccagtccgtcgtgctcacctacgtcagctga
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