Clupea harengus (Atlantic herring): 105892731
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Entry
105892731 CDS
T09045
Name
(RefSeq) H-2 class II histocompatibility antigen, A-D alpha chain
KO
K06752
MHC class II antigen
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04514
Cell adhesion molecules
char04672
Intestinal immune network for IgA production
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105892731
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105892731
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
105892731
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105892731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105892731
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105892731
Exosomal proteins of epithelial cells
105892731
Exosomal proteins of breast milk
105892731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
I-set
ig
C2-set_2
Motif
Other DBs
NCBI-GeneID:
105892731
NCBI-ProteinID:
XP_012674490
Ensembl:
ENSCHAG00000014702
UniProt:
A0A6P3VL91
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Position
13:complement(16049859..16055369)
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AA seq
237 aa
AA seq
DB search
MTLIWILLVLTGIICTEAKIVHVDIALTGCTDSDGEDMHGLDGEEMAHADFFKRKYVMTL
PEFADQFKYVEGTYEQAVAGQQVCKQNLQTIIQAYKSPAVAEAPPVSYIYPRDEVKVGSD
NTLTCLITGFYPPRLTVRWTKNNKNVTQGVRSSQLRMNVKDGSYNQFFTLNFTPQKGDIY
TCTVEHQALERPMTKAFDVEVSEPSLGPSVFCGVGLTLGLLGVAAGIFFFIKGNHCK
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgactttaatatggattttactggtccttactgggattatctgcacagaggccaagatt
gtacatgtggatattgctctgaccgggtgcacagactcagatggagaggacatgcatgga
ctggatggggaagagatggctcacgcagacttcttcaagcgcaaatacgttatgacactg
cctgagtttgctgatcagtttaaatatgtggaaggcacatatgagcaggcagttgcaggc
cagcaagtctgcaaacagaacttgcaaacaatcatacaagcatacaaaagtccagcagta
gcagaggccccccccgtcagttatatctaccccagagatgaggtgaaggtgggctctgac
aacactctcacctgtctcataaccgggttctaccctccccgactcaccgtgcggtggacc
aagaacaacaagaacgtgacccaaggagtgaggagcagtcaactccgcatgaatgttaaa
gacggctcctacaaccagttcttcaccctgaatttcacccctcagaaaggggacatctac
acctgcactgtggagcaccaggcactggagaggcccatgacaaaagcgtttgatgttgag
gtgtcagagcccagtcttggtccctcagtgttctgtggagtgggtctgactctgggactg
ctgggagtggctgccggaatattcttcttcatcaaggggaaccactgcaagtga
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integrated database retrieval system
