Clupea harengus (Atlantic herring): 105893071
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Entry
105893071 CDS
T09045
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X3
KO
K04355
brain-derived neurotrophic factor
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105893071 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
105893071 (bdnf)
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Growth factors (RTK binding)
105893071 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
105893071
NCBI-ProteinID:
XP_012674865
Ensembl:
ENSCHAG00000006667
UniProt:
A0A6P8GXX9
LinkDB
All DBs
Position
20:14671805..14694363
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AA seq
269 aa
AA seq
DB search
MTILFLTMVISYFSCLRAAPLREGPGVRGHRVEGYLGAAATAGRGHGTPQSGGGLPSLTD
TFEQVIEELLEGEGGDTQGGSEGSQGGGGPGPAGSAAVAAAVAAEAKDVDLYASRVMLSN
QVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVTAVDKKTAID
MSGQTVTVMEKVPVPNGQLKQYFYETKCNPQGYTKDGCRGIDKRHYNSQCRTTQSYVRAL
TMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcatacttcagttgcttaagagccgcgccc
ttgagagaaggcccaggtgtacgaggacaccgagtggagggctacctgggcgccgcggcg
actgctggccggggccacgggactccacagagtgggggggggctgccctcgctcacagac
acgtttgagcaggtgatcgaggagctgctggagggcgaggggggcgacacccaggggggc
agcgaagggtcccagggaggggggggtcccggcccagcaggctcggcggcggtggcggcg
gctgtggcggcggaggccaaagacgtcgacctgtacgcctcacgcgtcatgctcagcaac
caagtgcctttggagccccctctgctcttcctgctggaggaatacaaaaactacctggac
gctgcgaacatgtccatgcgcgtcaggaggcactcggaccccgcccggcgcggagagctg
agtgtctgtgacagtattagccagtgggtgacggcagtggacaaaaagacggccatagac
atgtctgggcagaccgtcaccgtcatggagaaggtccccgtgcccaatggtcaactgaag
caatatttttacgagaccaaatgcaacccgcagggatacacaaaggacggctgtcgggga
atagacaagcggcactataactcacaatgccggacaacccagtcgtacgtgcgtgcactc
accatggatagcaaaaggaagattggttggcggtttatacggatagacacctcctgtgtt
tgcacattgaccattaagagaggaagatag
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integrated database retrieval system
