Clupea harengus (Atlantic herring): 105893966
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Entry
105893966 CDS
T09045
Symbol
znf407
Name
(RefSeq) zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105893966 (znf407)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105893966 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_ZN142
zf-C2H2_jaz
zf-met
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-C2H2_ZNF462
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
105893966
NCBI-ProteinID:
XP_012675891
Ensembl:
ENSCHAG00000021418
UniProt:
A0A6P3VMF6
LinkDB
All DBs
Position
11:complement(26884078..27028407)
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AA seq
1706 aa
AA seq
DB search
MDTRPKRKLRSAKELTEDGNKDEEPHSDPGSSSRVETEAAEIPTTPSKEDEVTSGCSTSH
RPEESQSSAVQDSGEHKQPNIAPTKERDDDCTCSLCDFVAKTPTALKIHAKRKHFRRGGG
SRSESAQGRKTNKEVSKAVSVTAKRRDDKKSSQHEEHNPQAIVTLTSRQQDESAVADCKD
SGLPPPGEAVSSEEQTESTESRHVSPTQLLLEMVDPSAGGTGQVLDGKEMSSTEEIREHG
ESQTKSEPSSDTFKESDLNEGECPKKIGKRGPKPRTVHACTHCGHEFRDKPSLVTHVKRR
HTKEMSYFCELCSYACVAKCDYEKHCVSNKHKRRVAENSETSRPLLPPDRNETEEQQDQR
GGAQATPTRAVKRSASGRPQLQCGSCAFRASTSALLESHARLKHPAEHRFHCKACHYYTA
TTEGMEAHLAGEAHQRVAKEKNIGASYEDCVEKVLVILSQNVQRTSDGGADADGEAPEDV
KEAGIDEMQEAEQAVEAVSTDEKSEDGSPAKRKRGRPKVANVTTCHYCGLVASNATNLSV
HIRRRHSHQYSYACKLCSYYCVTKGDMDRHCVTKKHLKRSEAAGSADAVVQVLSVNQAGK
DGEDEAMQVDGPDDVGTSQSEGDATMAESVADSETPSQTTDKSDAQSSPNANSFPLKKSK
YDSVNSCAHCDFVAHSIPSLELHVKRKHTKDFEFVCLACNYYAVTRREMSRHASTDKHKQ
KSQLYQERSSGKDVDASNNSEKLRNAAELVVLVEPPATEQVQASEAESEHCESVPDQTAV
TPNAEVSGDQVKETVTSEDGVNDEKVSEIKGHEVAQDSAVTEDAVTIKLDPNDTETVLDA
PPVKDTLERETEPEEEGLDDYDEEEEDLIEGKCDGSFADKQLVRAIPFDSCIIALKGLQE
GESTQQDGITSLGGATSSIMVTGVSSPMKVRRSKSLCPATRGLTPGQRIRCEDCGFMADG
LSGLNVHISMKHPSKDKHFHCLLCGKSFYTESNLHQHLTSAAHLRNEQASIEELPEGGAT
FKCVKCNDPFETEQELFVHIKEKHEELLREVNKYVLEDTEQINREREENQGSVCKHCGKV
CKSSNSMAFLAHVRTHTGSKPFRCKICNFATAQLGDARNHVKRHLGMREYKCHVCGWAFV
MKKHLSTHLLGKHGVGRPKERKYECDLCDRSFSERWALNNHMKLHTGDKPFKCAWPSCHY
AFLTLSAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGERPFRCHLCNFASTT
QSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYATNAP
MEFRNHLKEMHADIENPDLAYLHAGIVSKSFECRLKGQGASFVQAETVFIPEDASSSAAA
TLCRIGTSGLEGLGSEAVQQVIIIQGYDGSGGNLAVEQALEESAAATLQTLAMGGQVAEV
LHITEDGQLITSSGRPASAAGTTHIQLPHGTTQYVLVESSGQAAATAAAILEGQGATVVG
GGRVEAHGHTVVSESSTSSALDALLCAVSELGQRGAGVGAGNGGEEEVVTTTVGDGEIVT
TTVGDEEGAEEEEEVREEVTEGEVQVYREVMEGEEEGSEEVGMVTQVVGHAASNARHDEM
VQEVLQFAASQLMMKEGLTQVIVNDEGTHYIVTELDDSTLQLEGTVYTQSTEVEQEEEVA
EEEAQDTEERVVVYTEEAPHGDHQEG
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggacacaaggccaaaaagaaaacttcgatctgcgaaagagctaactgaagatggaaac
aaagatgaagagcctcatagtgacccaggaagtagttccagagttgaaacggaagcagct
gaaattcctaccacaccttcaaaggaagatgaggtcaccagtggatgttctacatcacac
agacctgaggagtcccagtcctcggcagtgcaggattctggtgaacacaagcagccgaac
atagctcccactaaagagagagatgatgactgtacttgctctctgtgtgactttgtagca
aaaaccccaactgccctgaagattcatgctaaaagaaagcatttccgcagaggtggtggt
tctcggagtgaaagtgcccagggcaggaagaccaacaaagaggtatcaaaagctgtttcc
gtcacagctaagagacgtgatgacaagaagagctcacaacatgaagaacacaatccacag
gctatagtgaccttaacgtcacgtcaacaggacgaaagtgcagttgcagattgcaaagat
tcggggctgccacctccaggtgaagctgtgagttcagaagagcagactgaaagcactgaa
agtagacatgtcagccccacccagttgctcctggagatggttgatccttctgctggaggg
actggacaggttttagatggaaaggaaatgtcctctacagaagagatacgtgaacatggg
gaaagccaaacaaaatcagagcccagttctgacacattcaaagagagcgacttgaacgag
ggagagtgtccgaaaaagataggaaaacggggaccaaaacccaggactgtgcatgcgtgc
acccactgtggccatgagtttcgggacaagcccagtctggtgactcatgtcaagagacgc
cacacaaaagagatgagctatttctgtgagctgtgctcctatgcctgcgtcgccaaatgc
gattacgaaaagcactgtgtgagcaataagcacaaaagaagagtcgcagaaaacagtgag
acgtcgaggcctttgctccctccggatcgtaatgagacggaggagcagcaggaccagcgt
ggaggtgctcaggcaactccgactcgggcagtaaagcgctcagccagcggcaggccacag
ctgcagtgcgggagctgtgctttcagggccagcacttccgccctactggagagtcacgct
agactgaagcacccagctgagcaccgcttccactgcaaggcctgccactattacactgcc
accactgagggcatggaggcccacttagccggcgaagcccatcaacgggttgccaaggag
aaaaacataggagcctcgtacgaggactgcgtcgagaaggttttggtgatcctgtcgcag
aatgtccagaggacgagtgatgggggggcagacgcggatggcgaagcacctgaggacgtg
aaggaagctgggattgatgagatgcaggaagcagagcaagcagtggaagccgtgtccact
gatgagaagagcgaggatggctccccagccaaaaggaagaggggaagaccaaaggtggca
aacgtaacaacatgccactactgtgggctcgtcgcttccaacgcaactaaccttagtgtg
cacatacgtcgcaggcacagtcaccagtacagctatgcttgcaaactctgcagctattac
tgtgtgacaaaaggggatatggaccgtcactgtgtcaccaaaaagcaccttaagcgttcc
gaggctgctggcagtgcagacgctgtcgtacaagttctgagcgtgaaccaagctggaaaa
gatggtgaggacgaggcaatgcaagtggatgggcccgatgatgtagggactagccaatct
gaaggagatgctaccatggcagagtcagtggcagatagtgagacgccttcccaaacaaca
gacaaatctgacgctcagagcagcccaaacgcaaatagctttcccctgaagaagagcaag
tatgactcggtcaattcttgtgcgcactgtgacttcgtggcccactccattccatcactt
gaactccacgtaaagaggaagcacaccaaagatttcgagtttgtgtgcctggcgtgcaac
tactacgcagtgacccgcagagagatgtcacgccacgcgtccacagacaagcacaaacag
aagagtcagctctatcaagaaaggagctcagggaaagacgttgatgcatcgaacaacagt
gaaaagctacgcaatgctgctgagcttgtagtgcttgtagagcctcctgctacggagcaa
gtccaggcatcagaagcagaatcggaacactgtgaatctgttcctgatcaaactgctgtt
acaccaaacgctgaggtttccggtgatcaagtaaaagaaacagtgacctcggaggatggt
gtgaatgatgaaaaagtgtctgagataaaaggtcacgaagtggcccaagactctgctgtg
accgaagatgcagttacaataaaactagacccaaatgacaccgaaacagtcctggatgcc
ccacctgtgaaggacactctagaaagggaaacagagccagaggaggaaggcttggatgat
tatgatgaggaagaggaagatctgatcgagggcaaatgtgacggctcttttgccgataag
cagttggtcagagcaatcccgtttgattcatgtatcatcgctctgaagggtttgcaggaa
ggtgagtcaacccagcaggatggcatcacaagtttaggaggtgctactagcagtattatg
gtgactggtgtctccagtcctatgaaagtccggagaagcaaatcactgtgccccgctact
cgggggttgacacctggtcagcgaatcaggtgtgaggactgtggcttcatggccgatggc
cttagtggtctaaatgttcacatctcaatgaaacacccatcaaaagacaagcactttcat
tgcctgttatgtggcaagtccttctacaccgagagtaacctgcaccaacacctgacgagc
gcggctcacctccgcaacgagcaggccagcattgaggagctccccgagggtggtgccacc
ttcaagtgcgtcaagtgcaacgaccccttcgagacggagcaggaactgtttgtgcacatc
aaagagaagcacgaggagctgctgcgggaggtcaacaagtacgttctggaggacacggag
cagatcaaccgcgaacgcgaggagaaccagggcagcgtgtgcaagcactgcggcaaggtg
tgcaagagcagcaactccatggccttccttgcccacgtgcgcacccatacaggatccaaa
cccttccgctgtaagatctgtaacttcgccactgcccagctcggcgacgctcgcaaccac
gtgaaacgacacctgggaatgagggaatacaagtgccacgtctgcgggtgggcctttgtc
atgaagaagcacctgagcacacacctgctggggaagcacggcgtaggacgacccaaagag
aggaagtacgagtgtgacctgtgtgaccgctcgttcagtgagcgctgggccttgaacaac
cacatgaagctgcacacgggggacaagcctttcaagtgcgcctggccctcttgccactac
gccttcctcaccctctccgccatgaaggaccactaccgcacccacacaggagagaagtcc
tttctgtgtgacctctgtggcttcgctggtggcactcgtcatgccctcaccaaacaccgg
cgtcaacacacaggtgagaggccgttcaggtgccacctgtgtaacttcgcctccaccacg
cagtcgcacctgacccggcacaagcgcgtgcacacgggcgagaagccctaccgctgcccc
tggtgtgattacagatccaactgtgcggagaacatccgcaagcacatcctgcacacgggc
aagcacgagggagtgaagatgtataactgccccaagtgcgactacgccaccaacgccccc
atggagttccgcaaccacctgaaggagatgcacgccgatatagagaacccagacctggcg
tatctgcacgcaggcatcgtgtccaagtcctttgagtgtcgcctgaagggccagggagcc
tccttcgtccaggcggagacggtcttcattcctgaagacgcgtcctcgtcggctgctgcc
actctgtgccggatcggcacgtcgggtctggagggcttgggctcggaggcggtgcagcag
gtcatcatcatccagggctacgacgggtccggcggcaacctggcggtggagcaggctctg
gaggagtcggcggccgccacgctccagaccctcgccatgggcggccaggtggccgaggtg
ctgcacatcaccgaggacggccagctcatcacctcctccggtcgcccggcgtccgccgcc
ggcaccacgcacatccagctgccgcacgggaccacgcagtacgtgctggtggagtccagc
ggccaggctgcagccacggcggcggccatcttggaggggcagggggccaccgtagtggga
gggggccgggtggaggcgcacggtcacacggtggtgtccgagtcgtcaacgtcgtcggcg
ctggacgcgctgctgtgcgcggtgagcgagctgggccagaggggcgccggcgtcggcgct
ggcaacggcggggaggaagaggtcgtcaccaccacggtcggggacggagagatcgtcacc
accacggtcggggacgaagagggcgctgaggaggaagaggaggtcagagaggaagtcacc
gagggagaggtgcaggtctacagggaggtgatggaaggggaggaggaggggtctgaggag
gtgggcatggtgacccaggtggttggccacgccgcgtcgaacgcgcgccacgacgagatg
gtgcaggaggtgctgcagttcgccgccagccagctgatgatgaaggagggcctcacgcag
gtcatcgtcaacgacgaaggcacgcactacatcgtcacggagctggacgactccaccctg
cagctggagggcaccgtctacacccagagcaccgaggtagaacaggaggaggaggtggct
gaagaggaggcccaggacaccgaagagagggtggtggtctacactgaggaggcccctcat
ggtgaccatcaggagggatga
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integrated database retrieval system