Clupea harengus (Atlantic herring): 105894549
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Entry
105894549 CDS
T09045
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03250
Viral life cycle - HIV-1
char03260
Virion - Human immunodeficiency virus
char04060
Cytokine-cytokine receptor interaction
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105894549 (cd4-1)
03260 Virion - Human immunodeficiency virus
105894549 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
105894549 (cd4-1)
04514 Cell adhesion molecules
105894549 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
char04090
]
105894549 (cd4-1)
CD molecules [BR:
char04090
]
Proteins
105894549 (cd4-1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
Izumo-Ig
C2-set
GPR15L
Motif
Other DBs
NCBI-GeneID:
105894549
NCBI-ProteinID:
XP_031432610
Ensembl:
ENSCHAG00000012225
UniProt:
A0A6P8GBZ2
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Position
11:23299841..23318183
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AA seq
513 aa
AA seq
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MTVTSICGNRNRSMQKDTMYAVWVAPLLLIIAICPTWAQAGAKEPEAMYAQVGKSVRFPT
TDAIEDGVYMTWYWTATWPNDKPQEVFSKHGLGGTDIKPPWKNRVSVPDPDYSLTINKVI
GSDFGYFKYELKEKQTKNAEKVYRLYEVTLAPSSVVLSGATLALTCQVKSGTGAKLTWFP
PETADSTRKTDVPRPAFRSSTLTLANMSGRDKGVWTCSVNGHKADATTTIHVIDLSPSPK
EPIYTSVHATSQLQLPCSISSPVGWEMVLSKGLQGGSWSFLPDPGLEQGPKEPRLLASLP
ANSTRHWNITAGSGMDGSALQKGPQGNNLSLSKKAVTTQDRGTYTCALSFKTVNLERVIK
VEVLQVFARPSTSAFEGQSLNLTCTLGHSLAPELEVKWIPPKTAPLPAMGSSPQAHTLFI
AKVSVGQNGRWRCELRRNGTVLTYADVLLKIERVPVDVWLWVGIASTGLIVILLIFIGRS
LMRRYRQRRRTQRRKTRFCCCKDPNPQKGFYRT
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcacttccatctgcgggaacagaaacaggtccatgcaaaaggacacaatgtat
gctgtttgggtagcgccactacttctgatcattgcaatctgtccgacatgggctcaagca
ggggctaaagagccggaggcgatgtatgctcaggtgggaaaatcggtccggttccccaca
acagatgctatagaggatggagtatacatgacctggtactggactgcaacatggccgaat
gacaaaccgcaagaggtgttcagcaagcacggcttgggtggaaccgatataaaaccccct
tggaagaacagggtctctgtacccgaccctgactattccctcaccatcaacaaagttatt
ggctcagactttggatacttcaagtatgaactgaaagagaagcaaaccaaaaacgcagaa
aaagtgtaccgactgtacgaggtaaccctggctccttcctcagtggttctctctggagcc
acactagctctgacctgccaggtgaaatctggaactggagcaaaattaacctggttcccc
ccagagaccgcagacagtacacgaaagactgatgtccctcgcccagcctttagaagctct
acacttacattagcaaatatgtcagggcgtgataagggtgtttggacctgttcagttaat
ggacacaaagctgatgcaacaaccaccattcatgttatagacctctctccatcacccaaa
gagcccatctacacgtctgtccatgccacctcccaactccagctgccctgctctatctcc
tctccggtgggatgggagatggtcctgagcaaaggcctccagggagggagctggagtttc
ctccctgacccaggccttgagcagggccccaaggaaccacgtctgctcgcctctctcccc
gcaaattccacccgacactggaacatcacggcaggcagcgggatggacggctctgccctg
cagaaaggaccccaggggaacaacctgtctttgagtaagaaggctgtgacaacacaggac
aggggtacatacacctgtgcactgagcttcaagacagtcaatctggagcgggtcatcaag
gtggaggttctacaggtttttgccaggccgagcacctctgcctttgagggtcagtcactg
aatctcacctgcacactgggacacagcctggcccccgagctggaagtcaagtggatccct
ccgaagaccgcccccctccccgctatgggctcctctcctcaggcccacaccctcttcatc
gccaaggtgtctgtgggtcagaatgggaggtggaggtgtgagctgcggaggaatggcacg
gtcctgacatatgcagacgtgctgctcaagatagagcgcgtcccggtggatgtgtggctg
tgggtgggcatcgccagcaccggcctgattgtcatcctgctcatcttcatcggcaggtcc
ctgatgagacgctacagacagcggagaaggacacagaggcgtaagaccagattctgctgc
tgcaaagaccctaatccgcaaaaaggattctacaggacctga
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