KEGG   Clupea harengus (Atlantic herring): 105894549
Entry
105894549         CDS       T09045                                 
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
  KO
K06454  T-cell surface glycoprotein CD4
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03250  Viral life cycle - HIV-1
char03260  Virion - Human immunodeficiency virus
char04060  Cytokine-cytokine receptor interaction
char04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105894549 (cd4-1)
   03260 Virion - Human immunodeficiency virus
    105894549 (cd4-1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    105894549 (cd4-1)
   04514 Cell adhesion molecules
    105894549 (cd4-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:char04090]
    105894549 (cd4-1)
CD molecules [BR:char04090]
 Proteins
  105894549 (cd4-1)
SSDB
Motif
Pfam: Ig_3 Ig_2 ig I-set V-set Izumo-Ig C2-set GPR15L
Other DBs
NCBI-GeneID: 105894549
NCBI-ProteinID: XP_031432610
Ensembl: ENSCHAG00000012225
UniProt: A0A6P8GBZ2
LinkDB
Position
11:23299841..23318183
AA seq 513 aa
MTVTSICGNRNRSMQKDTMYAVWVAPLLLIIAICPTWAQAGAKEPEAMYAQVGKSVRFPT
TDAIEDGVYMTWYWTATWPNDKPQEVFSKHGLGGTDIKPPWKNRVSVPDPDYSLTINKVI
GSDFGYFKYELKEKQTKNAEKVYRLYEVTLAPSSVVLSGATLALTCQVKSGTGAKLTWFP
PETADSTRKTDVPRPAFRSSTLTLANMSGRDKGVWTCSVNGHKADATTTIHVIDLSPSPK
EPIYTSVHATSQLQLPCSISSPVGWEMVLSKGLQGGSWSFLPDPGLEQGPKEPRLLASLP
ANSTRHWNITAGSGMDGSALQKGPQGNNLSLSKKAVTTQDRGTYTCALSFKTVNLERVIK
VEVLQVFARPSTSAFEGQSLNLTCTLGHSLAPELEVKWIPPKTAPLPAMGSSPQAHTLFI
AKVSVGQNGRWRCELRRNGTVLTYADVLLKIERVPVDVWLWVGIASTGLIVILLIFIGRS
LMRRYRQRRRTQRRKTRFCCCKDPNPQKGFYRT
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgacagtcacttccatctgcgggaacagaaacaggtccatgcaaaaggacacaatgtat
gctgtttgggtagcgccactacttctgatcattgcaatctgtccgacatgggctcaagca
ggggctaaagagccggaggcgatgtatgctcaggtgggaaaatcggtccggttccccaca
acagatgctatagaggatggagtatacatgacctggtactggactgcaacatggccgaat
gacaaaccgcaagaggtgttcagcaagcacggcttgggtggaaccgatataaaaccccct
tggaagaacagggtctctgtacccgaccctgactattccctcaccatcaacaaagttatt
ggctcagactttggatacttcaagtatgaactgaaagagaagcaaaccaaaaacgcagaa
aaagtgtaccgactgtacgaggtaaccctggctccttcctcagtggttctctctggagcc
acactagctctgacctgccaggtgaaatctggaactggagcaaaattaacctggttcccc
ccagagaccgcagacagtacacgaaagactgatgtccctcgcccagcctttagaagctct
acacttacattagcaaatatgtcagggcgtgataagggtgtttggacctgttcagttaat
ggacacaaagctgatgcaacaaccaccattcatgttatagacctctctccatcacccaaa
gagcccatctacacgtctgtccatgccacctcccaactccagctgccctgctctatctcc
tctccggtgggatgggagatggtcctgagcaaaggcctccagggagggagctggagtttc
ctccctgacccaggccttgagcagggccccaaggaaccacgtctgctcgcctctctcccc
gcaaattccacccgacactggaacatcacggcaggcagcgggatggacggctctgccctg
cagaaaggaccccaggggaacaacctgtctttgagtaagaaggctgtgacaacacaggac
aggggtacatacacctgtgcactgagcttcaagacagtcaatctggagcgggtcatcaag
gtggaggttctacaggtttttgccaggccgagcacctctgcctttgagggtcagtcactg
aatctcacctgcacactgggacacagcctggcccccgagctggaagtcaagtggatccct
ccgaagaccgcccccctccccgctatgggctcctctcctcaggcccacaccctcttcatc
gccaaggtgtctgtgggtcagaatgggaggtggaggtgtgagctgcggaggaatggcacg
gtcctgacatatgcagacgtgctgctcaagatagagcgcgtcccggtggatgtgtggctg
tgggtgggcatcgccagcaccggcctgattgtcatcctgctcatcttcatcggcaggtcc
ctgatgagacgctacagacagcggagaaggacacagaggcgtaagaccagattctgctgc
tgcaaagaccctaatccgcaaaaaggattctacaggacctga

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