Clupea harengus (Atlantic herring): 105894641
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Entry
105894641 CDS
T09045
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00280
Valine, leucine and isoleucine degradation
char00650
Butanoate metabolism
char00900
Terpenoid backbone biosynthesis
char01100
Metabolic pathways
char03320
PPAR signaling pathway
Module
char_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
105894641 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
105894641 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105894641 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105894641 (hmgcs1)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
105894641 (hmgcs1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
105894641
NCBI-ProteinID:
XP_012676628
Ensembl:
ENSCHAG00000015925
UniProt:
A0A6P3VN87
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Position
12:26937358..26945863
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AA seq
532 aa
AA seq
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MTASSLRMPGSVPANGEATWPKDVGIIALEIYIPSQYVEQSELEQFDGVSAGKYTVGLGQ
ARMGFCSDREDINSLCMTVVQRLMERNCLSYDCVGRLEVGTETIIDKSKSVKSVLMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLSLDRGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIHAQWQREGVDQRFSLEDFDSMVFHSPYCRLVQKSLARLLLDDFLSHPNPNTES
GLYSGLEAFRDVKAEDTYFDRDVEKAFLKASGDMFEQKTKDSLLVSNQNGNMYTPSVYGC
LASVIAQKTPQQLAGQRIGVFSYGSGFAATLYSIRVTQDATPGSALDKIVASLSDLKARL
DSRTKVTPAAFADYMKLREETHHLASYTPQGSLDDLFPGTWYLTHVDEKHRRQYARRSES
DDTPLEAGLVNSTTTTTTTTTAEHIPSPAKKVPRMPATTAGPGLVTISNGDH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaagctctctcaggatgcctggatcagtccccgcaaacggtgaggccacctgg
cccaaagacgtgggcatcatcgccctggagatctacatcccctcccagtatgtggaacag
tcagagctggagcagtttgatggcgtctccgccggcaagtacaccgtgggcctcggccag
gcacggatgggtttctgctcagaccgcgaggacatcaactccctctgcatgacggtggtc
cagaggctgatggagaggaactgcctgtcctacgactgcgtaggccgcctcgaagttggc
acagagaccatcatcgacaagtccaagtctgtgaagtcggtcctcatgcagctgttcgag
gagtccggaaacaccgacgtggaaggcatcgacaccaccaatgcctgctacgggggtacg
gcggccctgttcaacgctgtcaactgggtagaatccagttcctgggatggccggtacgcc
ctggtggtggcaggagacattgccgtttatgcgacaggcagcgcccgacccacagggggc
gccggagcagtggccatgctcgtggggcccaatgctccactgtcattggacagaggtctg
cgggggacccatatgcagcacgcctacgacttctacaagccagacatggtgtccgagtac
ccagtggtggacggcaagctctccattcagtgttacctcagcgccctggaccggtgctac
tccgtgtaccgcaacaagatccacgcccagtggcagagagagggagttgaccagcgcttc
agtctggaagacttcgactccatggtcttccactcgccctactgcaggctggtgcagaag
tcgctggcacgtctgctcctcgacgacttcctgtcccaccctaatcccaacactgaaagt
ggcttatacagtggcctggaggcttttagggatgtgaaagcagaggacacctactttgat
cgggacgtggagaaagccttcctcaaagccagcggggatatgtttgaacagaagaccaag
gactctttgctagtgtccaaccaaaacggcaacatgtacaccccatctgtgtacggctgc
ctggcctcagtcattgcccagaagacgcctcagcagctggctggccagaggatcggcgtc
ttctcgtacggctcagggttcgccgccacactgtactccattcgagtcacacaggacgcc
acacctgggtccgctctggataagatcgtggccagcctgagtgatctgaaggccagactg
gactccaggaccaaagtgacccctgcggcgttcgccgactacatgaagctgagggaggag
actcaccacttagcgagctacactccccagggctcgctggacgacctgttccccggcacc
tggtacctgacgcacgtggacgagaagcaccgcaggcagtacgccaggcgctccgagagt
gacgacacacccctggaggccggcctggtcaactccacaacaacaacaacaacaacaaca
acagcagagcatatccccagcccagcgaaaaaggttccccgtatgcccgccaccactgct
ggccctggcttggtgaccattagcaacggggatcactga
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